EST details — SGN-E371610
| Search information |
| Request: 371610 | Match: SGN-E371610 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C178670 | Clone name: TUS-29-M4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178670 is on microarray TOM1 spot ID 1-1-5.1.4.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72347 [cLER-1-O19] | Trace: SGN-T92084 | EST: SGN-E280530 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C178670 [TUS-29-M4] | Trace: SGN-T183940 | EST: SGN-E371611 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E371610 | Length: 553 bp (877 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E371610 [] (trimmed)
GAAATATATGGGCCAAAAAAACATTACTTTTTGACCACCCTTTTATAGTCCGAAAAGGAAGGGTTTTTTTTATACTTGTTACAAGCAAGGGGTTT
TAATTAAGTAAAAAAATTTTTTTTTTTTTGTCTTTTATTTTAAAAAGTTTACAATAAAAAAAAATCCCCATAATTAACCCCTATTTATTTTTTTA
TTTTTGGGTTGGGGCAGAAACTTTTTTTTTATAAAACCAGCAGTTTTTTTTGCATCCATTTTTGTTTTTTTGGCAGAAACTGAAACATTTTTTAC
GTTTGCCATACCCCTTGCCATAAAAAGGAACGACTTTTACTGTTTTTTTTTTATCCAATTTCCCCGGTTTGGTAGTTTAAGTTGCCAACTCCTTA
GTTGCACCCTTAAATTTTATTTTTAAAAAAATACCCAAAAAAAAACCAAAAAACAAATTTGCTTTGGAACCCTTTTTTATTTTTTTTTTTTTTGT
TCAAACCTGCACCCGGGGGGATCCATTATTTTTAAAGCGGCCGCCACCGGGGGGGACCTCCATTTTTTGTTCCTTTTA
TAATTAAGTAAAAAAATTTTTTTTTTTTTGTCTTTTATTTTAAAAAGTTTACAATAAAAAAAAATCCCCATAATTAACCCCTATTTATTTTTTTA
TTTTTGGGTTGGGGCAGAAACTTTTTTTTTATAAAACCAGCAGTTTTTTTTGCATCCATTTTTGTTTTTTTGGCAGAAACTGAAACATTTTTTAC
GTTTGCCATACCCCTTGCCATAAAAAGGAACGACTTTTACTGTTTTTTTTTTATCCAATTTCCCCGGTTTGGTAGTTTAAGTTGCCAACTCCTTA
GTTGCACCCTTAAATTTTATTTTTAAAAAAATACCCAAAAAAAAACCAAAAAACAAATTTGCTTTGGAACCCTTTTTTATTTTTTTTTTTTTTGT
TCAAACCTGCACCCGGGGGGATCCATTATTTTTAAAGCGGCCGCCACCGGGGGGGACCTCCATTTTTTGTTCCTTTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E371610] | SGN-U592923 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T183939 [Download][View] | Facility Assigned ID: FA0AAD17BG02FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.808 | Expected Error Rate: 0.0293 | Quality Trim Threshold: 12.5 |
Working
