EST details — SGN-E371552

Search information 
Request: 371552Match: SGN-E371552
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178386Clone name: TUS-29-A8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178386 is on microarray TOM1 spot ID 1-1-1.1.4.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65283 [cLEM-8-N4] Trace: SGN-T85461 EST: SGN-E271910 Direction: 5' Facility: TIGR
Clone: SGN-C178386 [TUS-29-A8] Trace: SGN-T183880 EST: SGN-E371551 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371552Length: 660 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371552 [] (trimmed) GGAAGAAACAAAGTGGCCCTGCTTCAGCTGAAATTAAATCATCCAAGGATGCAGAAGATTTTATAGATGTCAATAAGATCATTATTGTTGGGGTC
TTTCCCGAGTTCTCCGGCGAGAAATTTGAGAATTTTACAGCTGTGGCTGAGAGATTACGTGCTGATTATGATTTTGGTCATACTTTGGATGCTAA
ACTCCTTCCTCGTGGGGATTCATCAGTTTCTGGCCCTGTGGTTAGGTTATTCAAGCCTTTTGATGAACTTTTTGTAGATTTTCAGGTGTTCGATG
TGGATGCTTTGGCAAAGTTAGTCGAAGAAGCAACTATTCCTACTGTGACTGTATTTAACAAGGACCCAAACAACCATCCATTTGTTGTTAAATTC
TTCAACAGTCCAAATGCCAAGGCCATGTTGTTCGTGAACTTCAACATATTTGATAGTTTCAAATCCAAGTATCATGAAGTTGCTGAGCAGTACAA
AGGCAATGATATTAGTTTCTTAATTGGTGATGTTGAGGCCAGTCAAGGTGCCTTCCAGTACTTTGGACTCAAAGAGGATCAGACACCTCTAATCA
TCATACAGACAAATGAAGGAGAGAAATATCTCATAACAAATGTTGAGCCTGATCACATTGCATCATGGGTTAAGGAGTTCAAGGATGGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371552] SGN-U577811 Tomato 200607 Build 2 65 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183881 [Download][View] Facility Assigned ID: FA0AAD17BA04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5