EST details — SGN-E371527

Search information 
Request: 371527Match: SGN-E371527
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178664Clone name: TUS-29-L22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178664 is on microarray TOM1 spot ID 1-1-3.4.3.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72341 [cLER-1-O13] Trace: SGN-T92078 EST: SGN-E280524 Direction: 5' Facility: TIGR
Clone: SGN-C72341 [cLER-1-O13] Trace: SGN-T92079 EST: SGN-E280525 Direction: 3' Facility: TIGR
Clone: SGN-C178664 [TUS-29-L22] Trace: SGN-T184293 EST: SGN-E371526 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371527Length: 292 bp (888 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371527 [] (trimmed) ATGATGGAGAAATTGTAAATTCTTGATTAATTATGGCATAGTCGTGCCTTTGCCAAGATTGCTTCACTGAAGAACTTGGAAGTTCACACAATGTT
AATGCTTCTACTAGTCCTGGCCATTAAATCTCTTTTGGTTTTTGCGTTCCATTGGGCTTTCATTCTCATGTCTAATAAGTTGTAGTAACTTATAT
TGTGACTTTGACTCTGATTCAAGAATGTGTAAATTAGAACAGCAAAGATTTGCTTGTTCGGAATATATCGATATATAGCAGTGCAAAATGCTTCT
TTGATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371527] SGN-U567552 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184294 [Download][View] Facility Assigned ID: FA0AAD17DF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5