EST details — SGN-E371185

Search information 
Request: 371185Match: SGN-E371185
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178077Clone name: TUS-28-D11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178077 is on microarray TOM1 spot ID 1-1-6.4.4.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64512 [cLEM-6-F4] Trace: SGN-T84502 EST: SGN-E270746 Direction: 5' Facility: TIGR
Clone: SGN-C178077 [TUS-28-D11] Trace: SGN-T183546 EST: SGN-E371186 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E371185Length: 662 bp (909 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371185 [] (trimmed) AAAGCGCGATCCAAATTTTATTTCATCCTCAATTACAATCAAGCCAAAAAAGAGCAATAACTTAACTTCATCAAAATGCTTTAGTAAACAGGGCA
AAAAAAAAAAATTAAAAGGGAAAACCTACCTAAAAAGGTAAAAGTTATACAAAAAAAAAAAAAACTAAACAAAATTTTAACAGGGTTAATTATAT
ATATATTTTATATATCTACAACATTATATAAATAAATTATTATCATTCATTGGATATTGCCAATGTTCTTGTTTTTTTTTTTTTTTTTTTTTTTC
ATCCTCTACGTCCCAAAAAAAGGGGGCATAGGAAGCCAACACATAGCAATCGTTGGGGGCAACTTTAAGAGCTTTGGGAAAGGGGGGGTTAGCAC
GAGGGACATTTTTATGGGCTCTCCAAATTAATTCAGCATAAAATGAAAGTACATTTCCATCACTTGGATTTGCTAAAATGGCTTTTTCACAATAT
TCTTGTGTTTTCACCATGGTTCCACTCACCTCTTAAAAGAATCTCGCATAATTTCCAAGAAGTAGGGAATTCCAGGGGTCAGCTTGAATCATCTT
TGGGTAATACAAATCAGTACTATACTCAAAACTATCTCCATCAGAATCACCATCACCGCCACCATCGCCACCAAATTTGTTTCCTTTACCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371185] SGN-U569433 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183545 [Download][View] Facility Assigned ID: FA0AAD16CB06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.911 Expected Error Rate: 0.0203 Quality Trim Threshold: 14.5