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EST details — SGN-E371039

Search information 
Request: 371039Match: SGN-E371039
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178451Clone name: TUS-29-D1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178451 is on microarray TOM1 spot ID 1-1-8.4.4.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72080 [cLER-1-B4] Trace: SGN-T91971 EST: SGN-E280417 Direction: 5' Facility: TIGR
Clone: SGN-C178451 [TUS-29-D1] Trace: SGN-T1492 EST: SGN-E378392 Direction: 5' Facility: Giov. Lab
Clone: SGN-C178451 [TUS-29-D1] Trace: SGN-T184109 EST: SGN-E371040 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371039Length: 501 bp (873 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371039 [] (trimmed) ACAGTGGAGGCATCACTTGCCATTTATCAGAATATATCAGTTTTCCAATACCATGAAAAGCTTAACATAACCGTAAACTCATTAAACAGAAACGA
GTATTCAAATCAAATTATAAGCTTCTTAGACAGTGAAGCAATATTGCTTTGATGAAATAATATGAAACTTCAAGTACATGCTCACAACCTTGGGG
CTGGAAGAGCAGCATGTGGGGTGTCCCATTCAGTGACAATGTGGTTTCTAGTAATCTCCTTCAGTGAGCGACAGCCACTCAATGCCATAGTTAGC
TCAAACTCATCGCGCAACATTTGCAGCACTTTTTTCACTCCAGCTTCTCCTTCAGCAGCCAATGAGAAAACTACTGGCCTTCCAATAAAAATGCC
TGAAGCTCCAAGTGCCAAAGCTTTAAAGACATCTGTTCCACGGCGGACACCTCCATCTTTAGCAGTATTTCACGCTCCCCTTCCAAACTTCCTGA
CGCTTGGACTCCCAAGCTGTGTTGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371039] SGN-U578941 Tomato 200607 Build 2 184 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184108 [Download][View] Facility Assigned ID: FA0AAD17CB01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0006 Quality Trim Threshold: 12.5