EST details — SGN-E370967

Search information 
Request: 370967Match: SGN-E370967
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178419Clone name: TUS-29-B17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178419 is on microarray TOM1 spot ID 1-1-8.2.4.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72047 [cLER-1-A11] Trace: SGN-T92017 EST: SGN-E280463 Direction: 3' Facility: TIGR
Clone: SGN-C178419 [TUS-29-B17] Trace: SGN-T184035 EST: SGN-E370966 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370967Length: 617 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370967 [] (trimmed) AAAAAGAAGCTATTCTTTGAAATGGAGTCTACCGGAAAAGTGAAGAAGGGTGCCGCCGGCAGAAGGGGAGGAGGCCCAAAGAAGAAGCCTGTTTC
CCGGTCTGTTAAGGCCGGTCTTCAGTTCCCCGTTGGAAGAATCGGAAGGTTTTTGAAAAAAGGCCGATACGCTCAACGTGTTGGTTCGGGTGCTC
CAGTTTACTTGGCGGCCGTACTTGAATATTTGGCTGCTGAAGTGTTGGAGTTGGCTGGAAATGCTGCCCGTGACAACAAGAAGAACAGAATCATC
CCAAGGCACTTGCTTTTGGCTGTGAGGAATGATGAAGAGCTTGGGAAACTTCTTGCTGGTGTAACAATCGCACATGGTGGTGTTCTTCCAAACAT
CAACCCAATTTTGTTGCCAAAGAAGACTGGAGGTGAAAAGGCCCCTAAATCTCCATCCAAAGCTACCAAATCTCCCAAGAAGGCATAGATTCTTA
ATGTTTTTTTTTTTTTTGGATCGTCTGTGTATGTAATTCTGTTGTTAGAAGGTGATGATTATCCTTGATGGAATTAGTTAAAACTACTGTTAGAT
CTTATTTTTCTCTATTATCAATCAATGAAACCCCTTGTTTCGACTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370967] SGN-U581128 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184036 [Download][View] Facility Assigned ID: FA0AAD17CA09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0021 Quality Trim Threshold: 12.5