EST details — SGN-E370960

Search information 
Request: 370960Match: SGN-E370960
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177989Clone name: TUS-27-P19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177989 is on microarray TOM1 spot ID 1-1-6.4.6.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64382 [cLEM-5-P23] Trace: SGN-T85110 EST: SGN-E271305 Direction: 5' Facility: TIGR
Clone: SGN-C177989 [TUS-27-P19] Trace: SGN-T183198 EST: SGN-E370961 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370960Length: 612 bp (885 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370960 [] (trimmed) ATAATACACAATTACATATCCATTTATGCGTAATCAACCGATAATTTCGATTAATTACAAACTTAGTAAGTAAACAAAAAGAATTAACAAGTACG
TAATGGCGATCCACACAAACAATCATTATTAGAGAAAGAAGAAGCTTCTAGATGATCGAAGGGTGACCCGTTTGGAATCGAGCCACAAAGGTGAT
TATGGCTTAAATCCAAATGACCAATGAACTTAGCTGATGATAATGATTTTGGAATTGAACCTCGAAGATTATTGTATGATAAATCCAGATGTGTG
AAGTACGTTTTTGTGCAAAATACATCTGGTAATTCTCCTTCTAATAAGTTTCTGCTTAAGTTTAAGATGTTTAATCCGCTGCTGCTAAGTAGATT
TGTGGGGATTGAACTGGTGATTTGGTTGGAATCGAGGTTTAGAGTGGAGAGAACCGGCATTGAACCGAGCTGAGCTGGGAGTGAACCGGTGATTT
GGTTCATTGATAGATCTAGATCGGCTAACCGGCGAAGTTGAGTGATTGAGTTAGGGATTGAACCTGTAAGTTTGTTTTTGTTGAGTAGTGCTCGG
CTCAATATTCCGAGTTTTCCGAAATCGGACGGGAATTTCCCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370960] SGN-U577694 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183197 [Download][View] Facility Assigned ID: FA0AAD15CH10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0070 Quality Trim Threshold: 20.5