EST details — SGN-E370855

Search information 
Request: 370855Match: SGN-E370855
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177845Clone name: TUS-27-J19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177845 is on microarray TOM1 spot ID 1-1-6.2.6.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64116 [cLEM-5-C4] Trace: SGN-T85016 EST: SGN-E271211 Direction: 5' Facility: TIGR
Clone: SGN-C177845 [TUS-27-J19] Trace: SGN-T183093 EST: SGN-E370856 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370855Length: 747 bp (903 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370855 [] (trimmed) ACAATAAAAACAACTTGCATTTATTAAAAATATATAATAAATAGAAAAAACATAATGCAATCACAACCATTCATTCCAATATATCATCATCACAT
GATCCCATTTTTTTTTTTGCATTGCCCAAATAACAGTCAACTAATCCTCTTTTGACTGCTCAAATTTCACATTAAACTCATTCTAATACTCAAAT
CTTACTATTAATAATAAAATAACCCAATACCAAGCCTTAATTAAACACTAATACTGATATAACATATCAAAAGAAGCCATAATTGGCTGATTAAC
ATACATCAAATTCCATGGATTCATCTGAAAATCCTCTTGATAATAATTATTATTATTATTTGAATTATTGATGTAAGTGAGGATTTCATTAAGAG
ATTGCAACCTTTGAGTTAATTCCATCATTTGTGCTCTTAAAACAGAGTTCTCTGCTTCAACATTACCATATTGTTGTGTTGTCATGGTGATGCTG
TTCAGAATGTTGCTGTTTTCTTTCTTCAATTGTGTAACTTGACACATCAAATCATCCAAATGTTTCTGTTTTCTCATTCTTGATCTTCTTGCTGA
TTCGCGATTCGATTGCATTCTCTTTCTTTTCCTTTCATCAACCACCATGAAAACTTCATCAGAAGCTGAATTGTTTGGAATCTGAGATGAATTAC
CACTAGAAGTAGCCATTTTTTTTATGTACAGATGATGGGAGAAGTACTAATTTTAAAGTTTCTTAAGGTATGCTAAGCAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370855] SGN-U566267 Tomato 200607 Build 2 48 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183092 [Download][View] Facility Assigned ID: FA0AAD15CE10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5