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EST details — SGN-E370800

Search information 
Request: 370800Match: SGN-E370800
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178278Clone name: TUS-28-L20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178278 is on microarray TOM1 spot ID 1-1-5.4.4.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65114 [cLEM-8-G1] Trace: SGN-T85318 EST: SGN-E271767 Direction: 5' Facility: TIGR
Clone: SGN-C178278 [TUS-28-L20] Trace: SGN-T183731 EST: SGN-E370799 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370800Length: 704 bp (877 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370800 [] (trimmed) GCTCATAAACCTCATAATTACTATTCTAATTTTCATAAATCATTAAGAATGGAAATGGTTAACAAGATTGCATGCTTTGTGCTTTTATGCATGGT
AGTGGTTGCACCCCATGCAGAGGCTTTAACTTGTGGTCAAGTTACATCTACCTTGGCTCCTTGTCTCCCTTATCTAATGAACCGCGGTCCTCTCA
GAAACTGTTGTGATGGTGTTAAGGGTCTTTTGGGTCAAGCCAAGACTACAGTAGACCGACAGGCCGCATGCACTTGCCTAAAATCAGCTGCTTCT
TCTTTTACAGGACTCAATTTGGGCAAAGCTGCTGCTCTCCCTAACACTTGTAGTGTCAACATCCCTTACAAGATCAGCCCCTCTACTGACTGCTC
TAAAGTTCAGTAAAGCTGATCATCAGAATTTGGTTTCATGAGGAGAATTAAGAATAAGATAGATAGCATTGATCTTGCTTATGGATCCTTTCTTT
CTATGTTGTATCAGTTGTCACTTTCTCTTTTTTCTGTGTTTCGTTTAAAATCGTATGTACTCGAGTCTTGTTTCGAAATTTGACGATTGATTATA
TTATATCAGTTGTTACTTTCTGTTTTCCTGTGTTTCTTTTAAAATCGTGTGTAGTCGAGTCTTGTATCGAAATTTCACGATTGGCTATGTTGTAT
TAATCTAATCTTTGATAATACACATCTATCTTATTTGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370800] SGN-U581465 Tomato 200607 Build 2 445 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183732 [Download][View] Facility Assigned ID: FA0AAD16DF10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0083 Quality Trim Threshold: 12.5