EST details — SGN-E370798

Search information 
Request: 370798Match: SGN-E370798
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178272Clone name: TUS-28-L14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178272 is on microarray TOM1 spot ID 1-1-3.4.4.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65098 [cLEM-8-F13] Trace: SGN-T85400 EST: SGN-E271849 Direction: 5' Facility: TIGR
Clone: SGN-C178272 [TUS-28-L14] Trace: SGN-T183729 EST: SGN-E370797 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370798Length: 636 bp (892 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370798 [] (trimmed) TTGAAACGATAGTGATTCACAAAGAAGAAGAAGAGAGATCTGAGTTTTGTGATACTGTTAATCATGGCTTCAAGTTCAACGAAGAACAATCCGCT
ACTACCAACGACGACGGCGATCGATCCATCACCGCCGCGGATGGAGGAGAAGCTCTTCAAAGGATCGGCCATGACCAAACGCGGTGCTTATGCTG
CTATCTCTTACATGTCATGTGCTGTTCTCTTGGTATTGTTCAATAAAGCGGCTCTTTCTTCATACAACTTCCCATCTGCAAATGTCATCACACTC
TGTCAGATAATATGCTCGTGTTGTTTTCTTTATCTCTTAAGACGGCTGAAGCTGATTTCTTTTCATTTGAGTGAATCGCTGGCTACGCCTGACAA
TTTTAAAACGTTTGTGCCACTGAAGACAGTAATTGATACTTTACCTGTTGCTGTGACCTATCTTCTCTACATGCTAGTCACGATGGAGTCTGTTC
GGGGAGTCAATGTACCCATGTACACAACCCTTAGGAGGACAACTGTTGTATTTACAATGATTGTGGAATCCATTCTTGCAGGTCAGAAGTATAGT
CGTCCTATTATTGGAAGTGTTGTGATAATCGTGTTCGGTGCTTTTGTTGCTGGAGCTCGGGACTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370798] SGN-U566888 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183730 [Download][View] Facility Assigned ID: FA0AAD16DF07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5