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EST details — SGN-E370759

Search information 
Request: 370759Match: SGN-E370759
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178030Clone name: TUS-28-B12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178030 is on microarray TOM1 spot ID 1-1-5.2.4.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64439 [cLEM-6-C20] Trace: SGN-T84583 EST: SGN-E270827 Direction: 5' Facility: TIGR
Clone: SGN-C178030 [TUS-28-B12] Trace: SGN-T183690 EST: SGN-E370758 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370759Length: 684 bp (899 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370759 [] (trimmed) GGAGAATCAGGGATGATAAGGAAATGGAAGCAGCAATTGTTGACGGTAATGGGACTGAGACAGGCCACATAATAGTGACAACTATTGGTGGTAGA
AATGGCCAGCCAAAGCAGACTATTAGTTACATGGCTGAACGTGTTGTTGGACAAGGATCCTTTGGGGTGGTGTTTCAGGCAAAATGCTTAGAGAC
TGGTGAAACTGTTGCTATTAAAAAGGTTCTTCAAGATAAAAGATATAAGAACCGAGAATTGCAGACAATGCGCCTTCTTGACCACCCTAATGTTG
TGTCTCTCAAACACTGCTTCTTTTCCACAACTGACAAGGATGAACTGTATCTTAACTTGGTTCTTGAGTATGTACCTGAAACCGTTCACCGTGTT
ATCAAACACTACAATAAGCTGAATCAAAGGATGCCGTTGATACTTGTGAAGCTTTATACATATCAGATTTTCAGGGCATTGTCTTACATACACCG
CACTATTGGAGTGTGCCACAGGGACATTAAACCTCAGAATCTTTTGGTGAATCCACATACCCACCAGGTTAAATTATGCGATTTTGGGAGTGCCA
AAGTTCTGGTTAAAGGAGAACCAAATATTTCTTACATCTGTTTTAGGTATTATCGAGCACCTGAGCTCATATTTGGTGCAACAGAGTACACTACT
GCTATTGATGTTTGGTCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370759] SGN-U578263 Tomato 200607 Build 2 109 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183691 [Download][View] Facility Assigned ID: FA0AAD16DA06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0077 Quality Trim Threshold: 14.5