EST details — SGN-E370575

Search information 
Request: 370575Match: SGN-E370575
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177806Clone name: TUS-27-I4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177806 is on microarray TOM1 spot ID 1-1-5.1.6.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C62231 [cLEM-1-O17] Trace: SGN-T83718 EST: SGN-E270345 Direction: 5' Facility: TIGR
Clone: SGN-C177806 [TUS-27-I4] Trace: SGN-T182949 EST: SGN-E370574 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370575Length: 727 bp (912 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370575 [] (trimmed) GAAATTGCCCATAGTAGGCGCTTTCTGTGTTCTTACTTTTGGTCTTTCTAATCTCTCTGTCCCTTTTACTAATACAGGTTTTGCTCATTCACTTC
CCTTTCCCCCTCTTCTGCGGTCGAAATTAGGTGGTGAAAGACGAAGTACAAGTGTTAGTAGAATAAGAATGGAAGCTAGCAGCAAGATTGTTCCA
AGCATTGTTGTTTATGTCACTGTTCCTAACAAAGAATTGGGTAAGAAACTGTCAGGGAGCATAGTCAAGGAGAAACTTGCAGCATGTGTTAATCG
AGTACCAGGTGTAGAATCGGTTTACGAGTGGCAAGGAGAGATACAGACCGATTCTGAAGAGCTGCTTATAATCAAGACCAGGGAATCCCTTTTAG
AAGCTCTTACGGAGCACGTGAAGGCCAACCATGAATATGATGTTCCTGAAGTGATTGCCATGCCCATAGTTGGTGGCAGTCCACAGTACCTAGAA
TGGCTCAAGAACAGCACAAGGGATGAATGATTTAGACCAAGACAAGCTTGTTCAACCTTGAGCCTGTAACTTAGTAAGAGTCGAACACAAACGTC
TATGTTATTTGGTATTTTCAAAGTACTTGTTACTTAAACGGTGTTGTTAGTCTTGGCTCTTGGTCTGAGTTACTATAATCTATCCCTAAATAGTA
TCTTTATCTTACATTCATGGGTGATTTTGGGCATTGTCCTTTGTATACATGGTGACCAGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370575] SGN-U568424 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182950 [Download][View] Facility Assigned ID: FA0AAD15BE02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0083 Quality Trim Threshold: 12.5