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EST details — SGN-E370455

Search information 
Request: 370455Match: SGN-E370455
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178667Clone name: TUS-29-M1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178667 is on microarray TOM1 spot ID 1-1-8.1.4.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72344 [cLER-1-O16] Trace: SGN-T91933 EST: SGN-E280379 Direction: 5' Facility: TIGR
Clone: SGN-C178667 [TUS-29-M1] Trace: SGN-T183795 EST: SGN-E370454 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370455Length: 556 bp (883 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370455 [] (trimmed) GTTGTATCTAGTATTCTATTGATTATTCGAAGAAAACACACAAAAAGAAGTAAAGATGATGCTCAAAATTAAGAGGGTTCCTACGCTTGTTTCTA
ACTTTCAAAAGGATGAGGCTGATGAAATTGCTGCTCGTGGTGCTGGTTGTGGCCGGAATTGCCTCAGGAATTGCTGCCTTCCAGGTTCAAAGCTG
CCACTGTATGGTTTCAAAAATTTGAGCTACGGCAAGTCTGTCGCCGATGAAACAAAGGAATCTCCGATCGACTTTCTGGAATCCCTTGTTCTTGG
GGAATGGGAGGATCGTCAGCAGAAAGGCCTCTTTCGCTATGATGTCACTGCTTGCGAAACCAAGGTGATTCCTGGAGAATATGGTTTCGTTGCTC
AACTGAATGAGGGAAGGCACCTCAAGAAGCGGCCAACTGAGTTTCGAGTTGATAAGGATCTGCAGCCTTTTGATGGAAGCAAGTTCAACTTTACT
AAGGTTGGACAGGAAGAGTAGCTCTTTCAGTTTGAAGCAAGCGAGGAAGATGAATTTCATGTCTATGCAGATACGCCAATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370455] SGN-U579800 Tomato 200607 Build 2 236 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183796 [Download][View] Facility Assigned ID: FA0AAD17AG01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0087 Quality Trim Threshold: 14.5