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EST details — SGN-E370396

Search information 
Request: 370396Match: SGN-E370396
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178299Clone name: TUS-28-M17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178299 is on microarray TOM1 spot ID 1-1-8.1.4.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65147 [cLEM-8-H19] Trace: SGN-T85406 EST: SGN-E271855 Direction: 5' Facility: TIGR
Clone: SGN-C178299 [TUS-28-M17] Trace: SGN-T183322 EST: SGN-E370395 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370396Length: 699 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370396 [] (trimmed) GGCTGCCCTATCTTTTTCTCCTACACAAACCCCCTTTCTCCTTTTCGGCGTTGCCGGCGGCGATCCTTTGTCTCGTCGGATCTCCGACCTATCCA
CCTTCCCTCTCCTCTCTTTATCATCTATCCTACTAAAAAATCGAAAAAAATTATCTATCGGAAAAACACATCAAAATTTTCTAGGGTTTCAGTAT
TTTTCTACTTCTATCAATTTCCAGTTCGATAGACGTCGGCTTTTTGAATTTATATATATTCTGAGATTTTGTATCTGCGAATAAAAAGAGGAGAG
GGAAGTCAGAAAAATAAAATCACAAAAAAAATCGGAAAACAGAAAATTATTTTTTTTGTTTTTGTGTTGAATTTTGATGGCGCAGGTTCAAGTGC
AGCCACAGGGTGCGAATGCTAGTGGTGTCAATCAGTTTGTGACGTCTCTGTACGTGGGTGACCTTGATGTCAATGTGACCGATTCACAGCTGTAT
GATCTGTTCAATCAGCTAGGACAAGTGGTTTCGGTTAGGGTTTGCAGGGATTTGACTACCCAGAGGTCGCTCGGTTATGGCTATGTCAATTATGG
GAACCCACAAGATGCTGCAAGGGCTTTGGAAGTGCTAAACTTTACTCCTCTCAGTGGAAAGCCCATAAGGATAATGTACTCAAACCGAGAACCAA
CTGTTCGAAGAAGTGGCACTTGCAACATATTTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370396] SGN-U579015 Tomato 200607 Build 2 233 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183323 [Download][View] Facility Assigned ID: FA0AAD16AG09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5