EST details — SGN-E370381

Search information 
Request: 370381Match: SGN-E370381
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178209Clone name: TUS-28-I23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178209 is on microarray TOM1 spot ID 1-1-2.1.4.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64997 [cLEM-8-A13] Trace: SGN-T85472 EST: SGN-E271921 Direction: 5' Facility: TIGR
Clone: SGN-C178209 [TUS-28-I23] Trace: SGN-T183309 EST: SGN-E370382 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E370381Length: 705 bp (865 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370381 [] (trimmed) GGTTGAAAAACAAAAATTTTAGCAAAAAGACAGCATGATTAGCACATAATGCAAAACAAAAGCATGTGAAACTTTTCCTCTTTTTCTGCAAAAGT
GCTAATTTTATCTCTGCAGATTCATTAGTCATTACTAAACAAACTGTTTAACTTAATCTTTTTAATTAATAAGAACATCCACGAGGAGCAAACCC
TAATCGAGAACCCGCAAGATCAAATACGACCCGAAAACCCTGTTGCTGGATATTCCCAATTATTGACAACCCGCCATTTGTACCCGCAAATCCAA
AGCAGTATCTCCCTTCAGTGTTCACTGGGATCATATAATTCGCCGCCGGTAATGCCACGTCAGCTCCGGCGAAGTGTAAAACCATCGTCGGTACC
TTCGCCTGTTTTTTCCCCGACAGATCATAACATGTATCGAACAAAGAGAAATTCGGTGCTCTCTTCAAATCTTTAGCACCCAATCTGAAAGCATC
CCTCACTGCTATATAACCGGGTCGGGTCAACCGGGTTACTGAAGTACCCGAATCGACTATAACCCCACCGTTACCTTCAGCATCAAGCTTAAACA
ACTCCGGCGTGACTGCCGGTACCTTCGTACCTCCGACGCTAATTCCGGTGAGCTCCACGTAGTAAAACGTGTCGAGTTTTGGATTGGTGAGGAGA
GGGGTAAAAATGGTATTTTCGGTAACGGCTGATTCGCCGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370381] SGN-U579829 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183308 [Download][View] Facility Assigned ID: FA0AAD16AE12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5