EST details — SGN-E370286

Search information 
Request: 370286Match: SGN-E370286
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178065Clone name: TUS-28-C23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178065 is on microarray TOM1 spot ID 1-1-2.3.4.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64491 [cLEM-6-E6] Trace: SGN-T84588 EST: SGN-E270832 Direction: 5' Facility: TIGR
Clone: SGN-C178065 [TUS-28-C23] Trace: SGN-T183214 EST: SGN-E370287 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370286Length: 694 bp (844 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370286 [] (trimmed) ATGAGAGTGAAAACTTTTAATTTTGATCATAATTTGGGGAAAAATAAATAAATTTTACATATTCGAAAGAGTCCAATTAATTTGAACCAAGAAGC
CATTATAATCGAATTCATCCACTATAATTTGAATAATGATAATTTCTTCGATCTTGTGTATTATTATTGGACTTGAGACTGTGAGTATTCATTTA
TCGACGTACGATATAATTCCACTGAGCTCTTTTACTTCTTCAATTCCTCCTCAGCATCCCACAAGAACCTAGCATATGATGCCACTACATAACAA
TCATGAGGGTCAAATTTAACAGCTTGATCAAAATAAGCATTGGCACGAGATGCATTTTTTTGAGTTAACCAAATTAGATCTGCATAAAGTGACAA
CACATTCCCATCCATTGGATTTAACACTACAGCTCTTCCGCAATATTCTTCTGCTTTTACTAAATCCCCCTTAACCTCTTTCAAAAACCTTGCGT
AGTTTGCGAGTAAAAGTGCATTTGTCGGGTAAGTTTCGATCATTTTCTTGTAATACGCTTCTGTATTTTCATTCCCATGCCAACCATTTGAATTA
TCCGAACCTGAACCCGAACCCGAACCATCTCCACCTCTGCCACCACCGGTCCAACGGCCACCGCTGTAGACTTTACCTCCGCCTCCGTCTTCCGG
TGCAGCGCAATAATCCTCCGATGATCCGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370286] SGN-U569219 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183213 [Download][View] Facility Assigned ID: FA0AAD16AB12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5