EST details — SGN-E370090

Search information 
Request: 370090Match: SGN-E370090
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177322Clone name: TUS-26-D24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177322 is on microarray TOM1 spot ID 1-1-1.4.6.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37180 [cLEG-41-E3] Trace: SGN-T72043 EST: SGN-E259011 Direction: 5' Facility: TIGR
Clone: SGN-C177322 [TUS-26-D24] Trace: SGN-T182703 EST: SGN-E370089 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370090Length: 537 bp (879 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370090 [] (trimmed) TCTCCGAAATGCCTGAATCTCATTTACGCCGGCGGAGGTCACCACCGGAGGAGCGGCTTAGGGAGATAGAAGTTCTCATATACTCAGCAGAAGGC
CTGAAGAACGTGAAACACTTGACCAGGATGAGAACCTACGCCGAGGTCTACGTGGTGAAAGACGTCCACGTGGCAAAAACCAAAATAGCGGAGCA
CACCGGCGACGGAGACGACGGGACCAATCCAATATGGAACCAGGTGGTGAAGGTGAAATTTCACGAAAAGCTGCCGGAAAATGACATCATGGCGG
CGTTAAACGTGGATATTTACGCTCACGGACACATTCGAGAGAAACCGGTGGGGAGCGCTCGAGTTTTGCTCTCCGATGTGTTGAAGGATACTAAA
TCGCCGGAATCGGAGATGCTGGAGAATAATCCGATCCAGTTTATGACAGTGTTAGTTTGGAGACCTTCTGGTAGGCCACAAGGTGTGCTCAACCT
GTGGGTCCCACCTACAGGGCGGTTCCTGGTTCCGTTGACTTCGTTGTCGNTTAACTTGAGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370090] SGN-U563608 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182704 [Download][View] Facility Assigned ID: FA0AAD14DB12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 0.0012 Quality Trim Threshold: 14.5