EST details — SGN-E370089
| Search information |
| Request: 370089 | Match: SGN-E370089 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C177322 | Clone name: TUS-26-D24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177322 is on microarray TOM1 spot ID 1-1-1.4.6.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C37180 [cLEG-41-E3] | Trace: SGN-T72043 | EST: SGN-E259011 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C177322 [TUS-26-D24] | Trace: SGN-T182704 | EST: SGN-E370090 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E370089 | Length: 261 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E370089 [] (trimmed)
AGGCTAAAAACAAATTACCTCAATATAATATTATTTTATTCCTAATTTTGAATGGATCGTCAATTTTAATTAAAGGATAATGAGCTTTGTCAAAA
TTACAATTTTTAAGTAACAAATACAAACAAGTTTATTACATTCAAATGGTATCCATGCACAGCTGGAAGAGCCTTACACCTCATTGTTACTCTCC
ACCGCCGGCTCATCCACCGATACCATCTTATTTTTTTCGGCGTCTCTTTCCCTCAAGCTAAACTACAACTA
TTACAATTTTTAAGTAACAAATACAAACAAGTTTATTACATTCAAATGGTATCCATGCACAGCTGGAAGAGCCTTACACCTCATTGTTACTCTCC
ACCGCCGGCTCATCCACCGATACCATCTTATTTTTTTCGGCGTCTCTTTCCCTCAAGCTAAACTACAACTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E370089] | SGN-U601578 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T182703 [Download][View] | Facility Assigned ID: FA0AAD14DB12FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.880 | Expected Error Rate: 0.0218 | Quality Trim Threshold: 14.5 |
Working
