EST details — SGN-E369558

Search information 
Request: 369558Match: SGN-E369558
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176984Clone name: TUS-25-F22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176984 is on microarray TOM1 spot ID 1-1-3.2.8.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28795 [cLEF-49-E10] Trace: SGN-T62378 EST: SGN-E248870 Direction: 5' Facility: TIGR
Clone: SGN-C176984 [TUS-25-F22] Trace: SGN-T182046 EST: SGN-E369557 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369558Length: 622 bp (910 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369558 [] (trimmed) CAAAGTAGAACGTTTTTACTGGGAACACTGGTATATAAATTTGAATGTGGCTCATCATCCGAAAGGTCATCCTGGCAAATCTCATCTCTCAAAAG
TAGTTGACCCAGGAGAGAGTGCATCTGAGGAGAGGAGTGCTCGGCGAACAGTGTTGGAATCATCTCTTCGTGAAGTTATGTTTCAGATAATAAAA
TTTGTAAATGAGAAAAAGGATCACATTCCTGCGATTTCAAATCTTGAGTGTGTCACTTTTCCCTATGAGATCACTATCTCAAGTTCATCAGATTC
TGCATTTGGGATGGATGTGATCAGGAGGATGCTACAGACTGGGCATCCGACCATGCTCAGCTGATTGGAGATACCCTGATGGTGGCCAATCTTCC
CCTTATCTCATTCTTTAAGAGGTAAAATGGTTGTTCATCCAATGTCTGGCAATGTGAATATTTCGGACCAAGTATAGTATGGGTTCCTCTAGTGG
CCTAGGAGTCTCACAATTGAAAGAAATGGAAGCTGTGGATATCTTTGCTTGATCTACTAATTTATTTTTTCCTTCGTGTTTCATATCATAGTAAA
CAACATATACAGCTGAATATTGCATGATCAATCTAATTAAGTTTGTTTAGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369558] SGN-U584267 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182047 [Download][View] Facility Assigned ID: FA0AAD13DC11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0027 Quality Trim Threshold: 12.5