EST details — SGN-E369547

Search information 
Request: 369547Match: SGN-E369547
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176928Clone name: TUS-25-D14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176928 is on microarray TOM1 spot ID 1-1-3.4.8.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28193 [cLEF-46-N22] Trace: SGN-T61839 EST: SGN-E247428 Direction: 5' Facility: TIGR
Clone: SGN-C176928 [TUS-25-D14] Trace: SGN-T182035 EST: SGN-E369546 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369547Length: 654 bp (922 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369547 [] (trimmed) GTTCCGGATATTGATATGCTCGGTTTTCTTCCTGATTTTCTTGATGGATTATTTAATATGCTGAGTGATTCTAGCCATGAAATACGGCAACAGGC
TGATTCTGCGCTTTCAGAGTTTTTGCAAGAGATTAAGAATTCTCCATCTGTAGATTATGGCCGCATGGCTGAAATACTAGTGCAAAGGGCAGGCT
CACAGGATGAATTTACTAGGCTGACTTCTATCACTTGGATAAATGAATTTGTGAAACTTGGTGGAGATCAACTTGTCCCTTATTATGCTGATATT
CTGGGAGCAATATTGCCTTGTATATCTGATAAAGAAGAGAAAATAAGAGTTGTTTCTCGTGAAACAAATGACGAACTTCGTGCAATTGAGGCTGA
TCCAGCTGAGGGTTTTGATGTAGGAGCAATCCTCTCTGTTGCTAGGAGGCAGTTGTCTAGTGAATGGGAGGCGACACGTATTGAATCATTACATT
GGATGTGGACCCTGCTTAATGGACATCGGTCCGAGGTCTTGGTTTTTCTGAATGATGTCTTTGACACTCTCCTAAGGGCGCTATCGGATCCCTCC
GATGAGGTAGTGCTCCTGGTTCTTGAGGTGCACGCATGCATAGCTGAAGATCCGCAACACTTTCGGCAGCTAGTTGTTTTCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369547] SGN-U566209 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182036 [Download][View] Facility Assigned ID: FA0AAD13DB07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5