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EST details — SGN-E369410

Search information 
Request: 369410Match: SGN-E369410
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176239Clone name: TUS-23-G21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176239 is on microarray TOM1 spot ID 1-1-4.3.10.4 [Order] [Tomato Microarray Database]
See unigene SGN-U581187 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C21649 [cLED-34-L2] Trace: SGN-T57296 EST: SGN-E243522 Direction: 5' Facility: TIGR
Clone: SGN-C176239 [TUS-23-G21] Trace: SGN-T180983 EST: SGN-E369409 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369410Length: 782 bp (932 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369410 [] (trimmed) GTTTCGCGTAAAGTGTCAGCAGCTTTTCCGATTTTCTGATCAGATTCAGATTTGTTTGGATTTTGATGGCTTCGAAACGAATATTGAAGGAGCTG
AAGGATCTCCAGAAGGATCCTCCTACTTCATGCAGCGCTGGCCCTGTTGGAGAGGACATGTTTCACTGGCAGGCTACAATAATGGGGCCCTCTGA
TAGCCCTTATGCTGGGGGTGTTTTTTTGGTCACGATCCATTTTCCTCCGGATTATCCATTCAAGCCTCCTAAGGTTGCTTTTAGGACAAAAGTTT
TCCATCCAAATATCAATAGCAATGGGAGTATATGCTTGGACATACTGAAGGAGCAGTGGAGCCCTGCATTAACTATTTCCAAGGTTTTGCTTTCA
ATTTGCTCACTTTTGACGGACCCAAACCCTGACGACCCCTTGGTTCCTGAGATTGCTCACATGTACAAGACTGACAAGTCCAAATACGAAGGAAC
CGCCAGGAGTTGGACCCAGAAGTATGCCATGGGTTAAAAAATTTAACCCTATGATGGCTTGAACTGATATAAACAAAAACAAATTTCAAATGTTT
TATCTTCTCTATTCTCCATTAACAATGTGTAGAATAGCATTAGGCGTTGCTTCTCTACAGGAAGAACGATAATGCTTTGAATTTGTTTATGTATG
AATACTAATATTTGAACTTTGAACATGTGTGGGAAGCGTATGTATCTGCTTTTTGACTGTTTCTGTTGGTTTGACGATCAATTTGGTAATTAATT
TCATACTTCAAAAGCCTTTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369410] SGN-U581187 Tomato 200607 Build 2 117 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180984 [Download][View] Facility Assigned ID: FA0AAD11AD11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0093 Quality Trim Threshold: 12.5