EST details — SGN-E368983

Search information 
Request: 368983Match: SGN-E368983
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177177Clone name: TUS-25-N23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177177 is on microarray TOM1 spot ID 1-1-2.2.8.12 [Order] [Tomato Microarray Database]
See unigene SGN-U576881 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C34243 [cLEG-30-D9] Trace: SGN-T69092 EST: SGN-E255366 Direction: 5' Facility: TIGR
Clone: SGN-C177177 [TUS-25-N23] Trace: SGN-T181937 EST: SGN-E368984 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E368983Length: 685 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368983 [] (trimmed) AAAAAAAATTATTTTAAAAAGTTCAATCTCAGGACCTCTGATTAAGGTAAATAACCATAGAAAACAATTTTGCATCTAATACAAGCTAGAGTATG
AATGTCCAACTCTAAAGCTTAAATCAGACAAATCTATTTCAAGATCCACTTGCTTCTAAGAGCTGAGGTTTAAAAATTGAGGTGGCCGAAACTTT
GAGAAAACAAAATCATCAATGCTACCACTGATCAAGAGAGTGCAGACTTTAAAGATGTGGTGAAGACCTCTAATTCCTTCAAGCCTTCTTCAGGC
GATTTTGCCTCACCTAATATTCTTACCATTGCACTACCAACAATGACACCATCAGCTCCCCATTCCGCCACCTGCTTAACATGTTCCGGTTTTGA
AATGCCAAATCCGACTGCCACTGGTTTAGACGTTGCCTCTTTAATGTCTAGTAGGAGAGACTGAACCTTAGAACTCACAGATGCACGAGCTCCAG
TAACTCCGACTGCACTTACAAGATACACGAATCCTTCTGAAGCTTCAGTTATCGCTTTCATGCGAATTTTTGGAGTAGTTGGTGTTGTAAGCAAT
ACCAATTCAATATTATGCCTAGCAGCTTCCTTTCTCAACATTTCAGTTTCCTCTAGAGGAACATCTGGAACAACAAGTCCGTGTACACCAGTATC
CCTTACAGTGGCCATGAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368983] SGN-U576881 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181936 [Download][View] Facility Assigned ID: FA0AAD13CG12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0056 Quality Trim Threshold: 14.5