EST details — SGN-E368437

Search information 
Request: 368437Match: SGN-E368437
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176259Clone name: TUS-23-H17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176259 is on microarray TOM1 spot ID 1-1-8.4.10.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C21708 [cLED-34-O2] Trace: SGN-T57384 EST: SGN-E243610 Direction: 5' Facility: TIGR
Clone: SGN-C176259 [TUS-23-H17] Trace: SGN-T181365 EST: SGN-E368438 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368437Length: 713 bp (925 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368437 [] (trimmed) ACTAGTTCTCCTTAATCGACGAACAGCAATGGCCTTCATCAAAGTCCAGAAGACAAGGGCTTACTTCAAGCGTTTCCAGGTTAAATTCAAGAGAA
GGAGAGAGGGAAAGACTGACTACAGAGCCAGGAATCGTTTGATCAATCAGGACAAAAACAAGTACAACACTCCAAAATACCGTTTCGTTGTTCGA
TTTACTAACAAGGACATAGTTACACAAATTGTGTCTGCTAGTATTGCTGGTGACATGATTCTTGCTTCTGCTTATGCAAGTGAGTTGCCTCATTT
TGGACTGAAAGTTGGATTGACAAACTATGCTGCTGCATACTGTACCGGACTTCTCTTGGCAAGGCGAGTTCTCAAGAAGCTTGAAATGGATGAAG
AATATCAAGGAAATCTTGATGTCAATGGAGAGGACTACTCTGTTGAACCTGCTGAAAGCAGGAGGCCTTTCCGTGCTCTCTTGGACGTCGGCCTC
TTAAGAACTACTACAGGGAACCGTGTGTTTGGTGCTCTCAAGGGTGCATTGGATGGTGGGATTGACATCCCTCATAGCGAGAAGAGGTTTGCTGG
ATACAGCAAGGACTCTAAGCAACTCGATGCAGAAGTTCACCGCAAGTATATCTATGGTGGCCACGTTGCTGCTTATATGAATACTTTGATGGAAG
ATGAACCTGAGAAATATCAGACACACTTCAGCTTATACATCAAGGCGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368437] SGN-U578255 Tomato 200607 Build 2 105 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181364 [Download][View] Facility Assigned ID: FA0AAD11CD09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5