EST details — SGN-E368080

Search information 
Request: 368080Match: SGN-E368080
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175846Clone name: TUS-22-G12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175846 is on microarray TOM1 spot ID 1-1-5.3.11.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16924 [cLED-17-P6] Trace: SGN-T53066 EST: SGN-E238624 Direction: 5' Facility: TIGR
Clone: SGN-C175846 [TUS-22-G12] Trace: SGN-T180558 EST: SGN-E368079 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E368080Length: 569 bp (943 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368080 [] (trimmed) CAGGAAAAAGGTGTAGTGTGAGAATCCAATTCTGCAACAATGAAGTACAATCCAAGGGTTTCCTCATCTCGCCGCAAGAGCAGAAAGGCCCATTT
CACTGCTCCATCAAGCGTTCGCAGGGTGTTGATGAGCGCACCGCTTTCATCTGAGTTACGTGCCAAGTACAACGTCAGATCTATCCCGGTAAGGA
AAGACGATGAAGTTCAAGTAGTAAGAGGAACCTACAAGGGCCGTGAAGGAAAAGTTATGCAAGTGTACCGTAAGAAATGGGTTATTCACATTGAA
CGTATAACTAGAGAGAAGGTTAACGGATCTACTGTTAATGTTGGCATTAATCCATCTAAGGTTGTTGTTACCAAACTCAGACTCGATAAGGATCG
TAAGTCTTTGTTGGATCGTAAGGCTAAGGGTCGTGCTGCTGCTGACAAGGATAAGGGTACAAAGTTCACTGCTGAGGAGGTCATGCAGACTATTG
ATTAGATTTAAAGTCATCTTTCTTCTATCTCTGCTGAAGAGAGGTTATATCAGTACGTTTTTGGTTTATTAGGGTTTTTGACATCTCTGAATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368080] SGN-U578367 Tomato 200607 Build 2 72 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180559 [Download][View] Facility Assigned ID: FA0AAD10BD06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0054 Quality Trim Threshold: 12.5