EST details — SGN-C36699
| Search information |
| Request: 36699 | Match: SGN-C36699 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C36699 | Clone name: cLEG-39-L3 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C181025 is on microarray TOM1: SGN-S1-1-2.3.17.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181025 [TUS-35-O7] | Trace: SGN-T187523 | EST: SGN-E375755 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181025 [TUS-35-O7] | Trace: SGN-T187524 | EST: SGN-E375756 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E257868 | Length: 618 bp (773 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E257868 [] (trimmed)
ATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTGGACTAAACTGATAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACA
TGGCGATCTTATTCCGAAGCTTCTGAGCCAACTCCGATAAATCCTCCACCACCACCTACTCCATCCCCTAATACTTCTACAACAACTTCAAGTGC
TCTCAATGAATTTGAACTCGCCAAATTCTGTGCCATTGCCGAAACCTGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTA
CAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTT
GGTTGTGGAGGCGGAATTATATCTGAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCG
CCTTCATGCGGATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTGAAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTG
TGATTGCGCTAGAGGTGATTGAGCATGTAGCAGATCCTGCTGGATTCT
TGGCGATCTTATTCCGAAGCTTCTGAGCCAACTCCGATAAATCCTCCACCACCACCTACTCCATCCCCTAATACTTCTACAACAACTTCAAGTGC
TCTCAATGAATTTGAACTCGCCAAATTCTGTGCCATTGCCGAAACCTGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTA
CAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTT
GGTTGTGGAGGCGGAATTATATCTGAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCG
CCTTCATGCGGATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTGAAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTG
TGATTGCGCTAGAGGTGATTGAGCATGTAGCAGATCCTGCTGGATTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E257868] | SGN-U564286 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T71554 [Download][View] | Facility Assigned ID: TBFFY62TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 20.5 |
Working
