EST details — SGN-E366258
| Search information |
| Request: 366258 | Match: SGN-E366258 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C109840 | Clone name: cLPT-1-D3 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C183228 is on microarray TOM1: SGN-S1-1-7.3.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183228 [TUS-41-K2] | Trace: SGN-T199474 | EST: SGN-E398148 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183228 [TUS-41-K2] | Trace: SGN-T199734 | EST: SGN-E398408 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E366258 | Length: 627 bp (877 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E366258 [] (trimmed)
ACAAATTCTTTGATTTTCTATTCAAAATGGCTTTCATTGTTAAAAGTGTCTCTGATATTTTCCTCCTTGCTCTTTTTACCTCACTCCAAGTTCTT
CATGCAAGGGATGGTCAACTTTTCAACAAAGGCCCAAGCAACAATGGTGAAAAGGAAACAGCAACAGTTGTTCCTAACAAAGAGCAACAAGAGCC
AAATTTCATGCCTGAAAATGAAAATGGTGCTTATGGCCTTTATGGTCATGAATCTGTTTCGACTCCTTCTACGACCACTAGTACCAATAACAACA
ATTTTACCAACAGCAAATACCTTCCCAAAAATTACAACCCTGTTTCTTATGTAACTGCTGCTGAGGACAACACCAATGAAAACACTTTCAACGAC
AACAATAACAATGATTTTTCATCCAATCACAGTATTGATACCTCTGCCTACACCACTAACTTGAATAACAACCAATTCTACAGAGGTCCCACCAA
TTACCGCAGTAACAGCAATAACAACCAGCAGCAACAGTACTACCACAGCGTCAGCGATTTCAGTGCTAAAAACCACAACAGCAACAACTACCATC
AGCAACAGTTATACAGTGGTGACAGTTTTTACAGCAACAACCCACAGTGCAACAACA
CATGCAAGGGATGGTCAACTTTTCAACAAAGGCCCAAGCAACAATGGTGAAAAGGAAACAGCAACAGTTGTTCCTAACAAAGAGCAACAAGAGCC
AAATTTCATGCCTGAAAATGAAAATGGTGCTTATGGCCTTTATGGTCATGAATCTGTTTCGACTCCTTCTACGACCACTAGTACCAATAACAACA
ATTTTACCAACAGCAAATACCTTCCCAAAAATTACAACCCTGTTTCTTATGTAACTGCTGCTGAGGACAACACCAATGAAAACACTTTCAACGAC
AACAATAACAATGATTTTTCATCCAATCACAGTATTGATACCTCTGCCTACACCACTAACTTGAATAACAACCAATTCTACAGAGGTCCCACCAA
TTACCGCAGTAACAGCAATAACAACCAGCAGCAACAGTACTACCACAGCGTCAGCGATTTCAGTGCTAAAAACCACAACAGCAACAACTACCATC
AGCAACAGTTATACAGTGGTGACAGTTTTTACAGCAACAACCCACAGTGCAACAACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E366258] | SGN-U581269 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T177683 [Download][View] | Facility Assigned ID: TPTAC14TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.936 | Expected Error Rate: 0.0186 | Quality Trim Threshold: 14.5 |
Working
