EST details — SGN-E366159
| Search information |
| Request: 366159 | Match: SGN-E366159 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C109781 | Clone name: cLPT-1-A15 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C183039 is on microarray TOM1: SGN-S1-1-4.3.3.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C109781 [cLPT-1-A15] | Trace: SGN-T177583 | EST: SGN-E366158 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183039 [TUS-41-C5] | Trace: SGN-T191468 | EST: SGN-E390142 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E366159 | Length: 578 bp (918 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E366159 [] (trimmed)
TTTTTTTTTAACAAGTTCAAAACTGAACCTAAATCACATATATGTGCACAAGTTCGTCAACGGATATCAACTTTACAGCAACACTTTACAGATCA
TAGGTGAAACCAGACTGATTGTGCTCCTAATTGTCTACCTTTGATAGTATCTCCAGCTTATTACACTCACTAGCAAACTAACATGTATAGGCAAT
TCTACATTATTATAAAGAAAAACGAAATGGACTCGATGCATAACCAAGATCCTGTATGTATAACGCATATGTATCACTTTGAAAGATAGAGATGT
TGGAGAACAAGAAGAAAAAGGGAAGTACTATACATGCAGGAAAATGAAGGACTAACTTAAGCTCTTGGATAGCGCAATCGCCCTTTTTTCCTGAG
GAACTCAGGAATTTCCACTGAACCACCTTCCACAAAGGACGCAGGTCGTCTGTTAGTTCCAAGTGAAGCATCTCCCTGTGCTAGTTGGTTTCCCT
GGAGGGGCCTCATATCACTTTCTTCTTGGCGCTTGAAACCAGTGGCAATCAGCGTTATGCTGACCTGTCCACTTATCGATGGGTCTATCACCGCC
CCAAAAAT
TAGGTGAAACCAGACTGATTGTGCTCCTAATTGTCTACCTTTGATAGTATCTCCAGCTTATTACACTCACTAGCAAACTAACATGTATAGGCAAT
TCTACATTATTATAAAGAAAAACGAAATGGACTCGATGCATAACCAAGATCCTGTATGTATAACGCATATGTATCACTTTGAAAGATAGAGATGT
TGGAGAACAAGAAGAAAAAGGGAAGTACTATACATGCAGGAAAATGAAGGACTAACTTAAGCTCTTGGATAGCGCAATCGCCCTTTTTTCCTGAG
GAACTCAGGAATTTCCACTGAACCACCTTCCACAAAGGACGCAGGTCGTCTGTTAGTTCCAAGTGAAGCATCTCCCTGTGCTAGTTGGTTTCCCT
GGAGGGGCCTCATATCACTTTCTTCTTGGCGCTTGAAACCAGTGGCAATCAGCGTTATGCTGACCTGTCCACTTATCGATGGGTCTATCACCGCC
CCAAAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E366159] | SGN-U585279 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T177584 [Download][View] | Facility Assigned ID: TPTAA08TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0087 | Quality Trim Threshold: 14.5 |
Working
