EST details — SGN-C35967
| Search information |
| Request: 35967 | Match: SGN-C35967 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C35967 | Clone name: cLEG-37-B6 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C182398 is on microarray TOM1: SGN-S1-1-5.4.8.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182398 [TUS-39-H12] | Trace: SGN-T191541 | EST: SGN-E390215 | Direction: 5' | Facility: INRA |
| Clone: SGN-C182398 [TUS-39-H12] | Trace: SGN-T191765 | EST: SGN-E390439 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E256350 | Length: 559 bp (917 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E256350 [] (trimmed)
AAATTGACTTTATTTATTAATAATATAATATATCACCTTCATTTTCATTTTCATTTGATAAATCAAGATTCAAATCACATTATGAAGAACTACAT
TCATTCAATTACTTCATAAAACTAAAAATTTTCCACAAAAAATCTTAATTTTGACGATTAGCAATGTAATCTGCTAAAGCAATCAATGGAGCAGC
TTTGTGTGAATCAAACGCCGCCAGCTGTTGTTTAGCTTCGCCGTTGAGCTCCGCCGCAAATTCCTTAGCCTTTTCCAATCCCAGCAGCTTCGGAT
ACGTCGTTTTATCAACCGCCAAATCTTTTCCGGCGGTTTTTCCGAGCTCCGACGATGACTTTGTCACGTCAAGGATATCATCAACTACCTGAAAC
AATAAACCGATGCATTGGGCAAATCTCCTTAACTTATCCACTTCTTCATCAGCTCCGCCGCCGAGGATTGCTCCGATTACAACGGAAGCTTCTAG
CAACGCCGCCGTTTTGTGTATGTGAATGAATTCAAGCATTTCTAATCCCACATTAAGGTTACCAGTACAAGCTAAATCCGCTAC
TCATTCAATTACTTCATAAAACTAAAAATTTTCCACAAAAAATCTTAATTTTGACGATTAGCAATGTAATCTGCTAAAGCAATCAATGGAGCAGC
TTTGTGTGAATCAAACGCCGCCAGCTGTTGTTTAGCTTCGCCGTTGAGCTCCGCCGCAAATTCCTTAGCCTTTTCCAATCCCAGCAGCTTCGGAT
ACGTCGTTTTATCAACCGCCAAATCTTTTCCGGCGGTTTTTCCGAGCTCCGACGATGACTTTGTCACGTCAAGGATATCATCAACTACCTGAAAC
AATAAACCGATGCATTGGGCAAATCTCCTTAACTTATCCACTTCTTCATCAGCTCCGCCGCCGAGGATTGCTCCGATTACAACGGAAGCTTCTAG
CAACGCCGCCGTTTTGTGTATGTGAATGAATTCAAGCATTTCTAATCCCACATTAAGGTTACCAGTACAAGCTAAATCCGCTAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E256350] | SGN-U571085 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T70834 [Download][View] | Facility Assigned ID: TBFFR03TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |
Working
