EST details — SGN-E358979
| Search information |
| Request: 358979 | Match: SGN-E358979 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C102243 | Clone name: cLHT-24-D16 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C184887 is on microarray TOM1: SGN-S1-1-4.4.14.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184887 [TUS-45-P5] | Trace: SGN-T198750 | EST: SGN-E397424 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184887 [TUS-45-P5] | Trace: SGN-T198751 | EST: SGN-E397425 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E358979 | Length: 456 bp (902 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358979 [] (trimmed)
TTGCATCTACCATCAGCTCAAATCCCAGCCTGTGTGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTC
TCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGG
AAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATCAA
AGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAG
GATTGGAGATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTTCATGAAGTGGATGA
TCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGG
AAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATCAA
AGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAG
GATTGGAGATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTTCATGAAGTGGATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E358979] | SGN-U579116 | Tomato 200607 | Build 2 | 46 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T170539 [Download][View] | Facility Assigned ID: THTDR20TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |
Working
