EST details — SGN-E358422
| Search information |
| Request: 358422 | Match: SGN-E358422 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C103075 | Clone name: cLHT-35-L13 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C184891 is on microarray TOM1: SGN-S1-1-8.4.14.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184891 [TUS-45-P9] | Trace: SGN-T198754 | EST: SGN-E397428 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184891 [TUS-45-P9] | Trace: SGN-T200053 | EST: SGN-E398727 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E358422 | Length: 549 bp (968 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358422 [] (trimmed)
ATAGTACTGCATTTTGTTATAGAGAGAGGAGAAATGTGTCTCACCGGACCCACACCGTTGGTCACTCTAATGGTGGTGGCCGCCGTCACTTTACC
GGCAAATGCCTGTCTGCCGGCGGACCAAGCAGCATTGATGGATATCAAAGCAGCTCTTAAGGAGCCATATTTGGGCATTTTCAGCACATGGACCG
GCAGCAACTGTTGCCAGGGCTGGCATGGTGTTAGCTGTGACCCCACTACTCAACGGGTTGCAGACATTGATCTTCGGGGAGAATCCGAAGATCCG
ATTTACGAGAAAGCCGGCCGGTCTGGTTACATGACAGGTTCACTCTCCCCTTCTCTCTGCAAACTAGACAAGCTCACTACACTCATCGTCGCAGA
CTGGAAAGATATCTCCGGCGAAATTCCGGCTTGTGTCACTTCATTACCAGATCTCCGAATCCTTGAGCTCATCGGCAACAAAATCACCGGTCAAA
TCCCGGAAAACATCGGTCAGCTGAGTAAACTCACTGTTCTAAACCTCGCCGATAATAAAATCTGCGGGTCAATC
GGCAAATGCCTGTCTGCCGGCGGACCAAGCAGCATTGATGGATATCAAAGCAGCTCTTAAGGAGCCATATTTGGGCATTTTCAGCACATGGACCG
GCAGCAACTGTTGCCAGGGCTGGCATGGTGTTAGCTGTGACCCCACTACTCAACGGGTTGCAGACATTGATCTTCGGGGAGAATCCGAAGATCCG
ATTTACGAGAAAGCCGGCCGGTCTGGTTACATGACAGGTTCACTCTCCCCTTCTCTCTGCAAACTAGACAAGCTCACTACACTCATCGTCGCAGA
CTGGAAAGATATCTCCGGCGAAATTCCGGCTTGTGTCACTTCATTACCAGATCTCCGAATCCTTGAGCTCATCGGCAACAAAATCACCGGTCAAA
TCCCGGAAAACATCGGTCAGCTGAGTAAACTCACTGTTCTAAACCTCGCCGATAATAAAATCTGCGGGTCAATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E358422] | SGN-U577694 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T172068 [Download][View] | Facility Assigned ID: THTFI67TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.990 | Expected Error Rate: 0.0131 | Quality Trim Threshold: 14.5 |
Working
