EST details — SGN-C34751
| Search information |
| Request: 34751 | Match: SGN-C34751 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34751 | Clone name: cLEG-32-A20 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180741 is on microarray TOM1: SGN-S1-1-6.3.17.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180741 [TUS-35-C11] | Trace: SGN-T187465 | EST: SGN-E375697 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180741 [TUS-35-C11] | Trace: SGN-T187466 | EST: SGN-E375698 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253624 | Length: 618 bp (833 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253624 [] (trimmed)
GGGAATATGGGGATGCGGTTGATCTCAAGTTTCTAAAGGATTTTCATCGTAGAAGGGTTCATCTTCTTGCAAACTCTGGTGCTGATCTAATAGCT
TTTGAGACCGTGCCAAATAAACTGGAAGCTCAGGCTTTTGTCGAGCTTCTTAAGGAAGAAGACATAAAGACTCCTGCCTGGTTATCCTTCAACTC
CAAAGACGGTGTAAATGTGGTCAGTGGTGATTCCTTGTCAGAATGTGCTGCAATTGGCGAATCATGTGAAAAAGTTTTGGCTGTTGGAATCAACT
GTACTCCTCCTAGATTTATTCTGGATCTTATTTTATCCATCAAGCAGGTAACAACAAAACCAATCCTTATATATCCCAACAGTGGAGAGAGTTAC
GATGGCATTCGCAAGGAGTGGGTGAGTAATACCGGGGTGACAGATGAAGATTTTGTTCCTTATGTTAATAAATGGTGCGAGGCAGGAGCATCCCT
GGTAGGAGGTTGCTGCAGAACTACTCCAAATACCATTAGAGCAATATACAAATCACTCTCTGGAAAACGCACTGTCTAATCTGGAGAACAAAATA
GGGGCATCTAACTTGAAAATTGAGACAAGATTTTGTGCCTGGGTCGAA
TTTGAGACCGTGCCAAATAAACTGGAAGCTCAGGCTTTTGTCGAGCTTCTTAAGGAAGAAGACATAAAGACTCCTGCCTGGTTATCCTTCAACTC
CAAAGACGGTGTAAATGTGGTCAGTGGTGATTCCTTGTCAGAATGTGCTGCAATTGGCGAATCATGTGAAAAAGTTTTGGCTGTTGGAATCAACT
GTACTCCTCCTAGATTTATTCTGGATCTTATTTTATCCATCAAGCAGGTAACAACAAAACCAATCCTTATATATCCCAACAGTGGAGAGAGTTAC
GATGGCATTCGCAAGGAGTGGGTGAGTAATACCGGGGTGACAGATGAAGATTTTGTTCCTTATGTTAATAAATGGTGCGAGGCAGGAGCATCCCT
GGTAGGAGGTTGCTGCAGAACTACTCCAAATACCATTAGAGCAATATACAAATCACTCTCTGGAAAACGCACTGTCTAATCTGGAGAACAAAATA
GGGGCATCTAACTTGAAAATTGAGACAAGATTTTGTGCCTGGGTCGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253624] | SGN-U582642 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69600 [Download][View] | Facility Assigned ID: TBFEV10TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
