EST details — SGN-E345619
| Search information |
| Request: 345619 | Match: SGN-E345619 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C141833 | Clone name: cTOF-18-A22 |
| ||
| Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180266 [TUS-33-O16] | Trace: SGN-T186617 | EST: SGN-E373652 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180266 [TUS-33-O16] | Trace: SGN-T186618 | EST: SGN-E373653 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E345619 | Length: 709 bp (904 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E345619 [] (trimmed)
GACACCAAAAATCTTATATAGAAAAAACTCTTCTCCAACATTTCGAAACTCCATTGTTTCTCTTTCTAAAGCTTTCTCTCACCTCCCAGGTTTTA
ATACAGAGAATTGAAGTTATGGGGAATAGAGTGGATCATGAGTACGATTACTTGTTTAAGATCGTGTTGATTGGTGATTCTGGAGTTGGAAAATC
GAACATTCTGTCTAGGTTTACGCGAAATGAGTTCTGTTTGGAGTCAAAATCTACTATTGGAGTTGAGTTCGCCACTAGAACTCTTCAGGTTGAGG
GAAAGACAGTCAAGGCCCAAATATGGGACACTGCAGGCCAAGAACGGTACCGAGCCATTACCAGTGCTTATTACAGAGGAGCAGTTGGTGCACTC
CTTGTTTATGACATAACAAAGGGACAAACATTCGACAATGTTCAAAGGTGGCTCCGAGAATTGAGAGACCATGCAGATTCTAACATTGTCATTAT
GATGGCTGGAAACAAGTCCGACCTTAACCACCTTCGAGCAGTCTCTGAGCAGGATGGTCAAAATTTAGCTGAGAAGGAAGGACTGTCATTTCTTG
AGACATCGGCATTGGAAGCAGTCAACGTAGATAAGGCTTTTCAGACTATACTAACCGAGATATACCATATCATAAGCAAGAAGGCGCTGGCTGCA
CAAGCAGCAGCCACAACCACTACTCTTNCTGGTCAGGGTACAAC
ATACAGAGAATTGAAGTTATGGGGAATAGAGTGGATCATGAGTACGATTACTTGTTTAAGATCGTGTTGATTGGTGATTCTGGAGTTGGAAAATC
GAACATTCTGTCTAGGTTTACGCGAAATGAGTTCTGTTTGGAGTCAAAATCTACTATTGGAGTTGAGTTCGCCACTAGAACTCTTCAGGTTGAGG
GAAAGACAGTCAAGGCCCAAATATGGGACACTGCAGGCCAAGAACGGTACCGAGCCATTACCAGTGCTTATTACAGAGGAGCAGTTGGTGCACTC
CTTGTTTATGACATAACAAAGGGACAAACATTCGACAATGTTCAAAGGTGGCTCCGAGAATTGAGAGACCATGCAGATTCTAACATTGTCATTAT
GATGGCTGGAAACAAGTCCGACCTTAACCACCTTCGAGCAGTCTCTGAGCAGGATGGTCAAAATTTAGCTGAGAAGGAAGGACTGTCATTTCTTG
AGACATCGGCATTGGAAGCAGTCAACGTAGATAAGGCTTTTCAGACTATACTAACCGAGATATACCATATCATAAGCAAGAAGGCGCTGGCTGCA
CAAGCAGCAGCCACAACCACTACTCTTNCTGGTCAGGGTACAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E345619] | SGN-U569324 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T157340 [Download][View] | Facility Assigned ID: TOFCR11TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0024 | Quality Trim Threshold: 14.5 |
Working
