EST details — SGN-C34321
| Search information |
| Request: 34321 | Match: SGN-C34321 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34321 | Clone name: cLEG-30-I15 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183551 is on microarray TOM1: SGN-S1-1-4.4.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183551 [TUS-42-H13] | Trace: SGN-T199683 | EST: SGN-E398357 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183551 [TUS-42-H13] | Trace: SGN-T199683 | EST: SGN-E399380 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183551 [TUS-42-H13] | Trace: SGN-T200361 | EST: SGN-E399381 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255451 | Length: 525 bp (861 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255451 [] (trimmed)
GTGATGATCCGATTAAGCATAAGGAGATAGTGGACAAAGTTCGAGATGCATCGGAGAAATGGGGTTTTTTCCAAGTGGTTAATCATGGGATTCCA
ACATCCGTCTTGGACAGAACGTTGCAAGGAACACGACAGTTCTTTGAGCAAGATAACGAGGTTAAGAAACAGTATTACACTCGAGATACTGCGAA
AAAAGTGGTTTATACTAGCAATCTTGATTTGTATAAATCTTCTGTTCCAGCTGCAAGTTGGAGAGACACGATTTTCTGTTACATGGCTCCGAATC
CTCCCAGTCTACAAGAATTTCCAACTCCATGCGGGGAGTCATTAATAGACTTCTCCAAGGATGTGAAGAAACTGGGATTCACTTTACTTGAATTA
TTGTCTGAAGGTCTCGGTCTCGATCGTAGTTATCTCAAAGATTATATGGATTGTTTTCATCTTTTCTGTTCTTGCAACTACTACCCACCATGTCC
TCAGCCAGAACTCACCATGGGCACCATTCAACATACCGATATTGGTTTTG
ACATCCGTCTTGGACAGAACGTTGCAAGGAACACGACAGTTCTTTGAGCAAGATAACGAGGTTAAGAAACAGTATTACACTCGAGATACTGCGAA
AAAAGTGGTTTATACTAGCAATCTTGATTTGTATAAATCTTCTGTTCCAGCTGCAAGTTGGAGAGACACGATTTTCTGTTACATGGCTCCGAATC
CTCCCAGTCTACAAGAATTTCCAACTCCATGCGGGGAGTCATTAATAGACTTCTCCAAGGATGTGAAGAAACTGGGATTCACTTTACTTGAATTA
TTGTCTGAAGGTCTCGGTCTCGATCGTAGTTATCTCAAAGATTATATGGATTGTTTTCATCTTTTCTGTTCTTGCAACTACTACCCACCATGTCC
TCAGCCAGAACTCACCATGGGCACCATTCAACATACCGATATTGGTTTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255451] | SGN-U578448 | Tomato 200607 | Build 2 | 590 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69177 [Download][View] | Facility Assigned ID: TBFEM56THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
