EST details — SGN-C32564
| Search information |
| Request: 32564 | Match: SGN-C32564 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C32564 | Clone name: cLEG-20-F5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180669 is on microarray TOM1: SGN-S1-1-6.4.19.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180669 [TUS-34-P11] | Trace: SGN-T187107 | EST: SGN-E375205 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180669 [TUS-34-P11] | Trace: SGN-T187108 | EST: SGN-E375206 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252614 | Length: 538 bp (914 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252614 [] (trimmed)
GTGAAATTTGCTTAAGCTCTTCAAGCAGTAGAGTTATTGCTTGGTTGCGAGATAAATAACTTTTTCTCACGTTGTTGTAATCTGATTTCACTTTT
GCTTGAGAAAGATTAGTGAAAACGGTTGAAAATTCTGTGTGACAGGTCGTGGTTTTACTCCCTTGAGCAATGAGGTTACCAGGTAAACTGCTTGT
GCTATTTTTTGTGTTTTCTTACTCTTTGTTCTTACTTCGAGTGTGTCAAGGGACCTGGACCGTTGACTGATATTGGACGCAAGTATTCTAACAAG
TAGTAATTGTTTTTTCTTACTCACCTATAAAGGGGAACGGTAGCAGAATCATCTGAGCCTGCTATGAATTCTTGATATTTTGTTGATAGAAAAAT
GTGTTTGAGCTTATCAATTCCTTTGAAGCCGGTAGCTAGTATGACTAAGTCGGATTTTATTGTTTCGGCCTGACCATCGAGCACAATACCTTCTT
TAGAAAATCCAAAGCAGTCTGCTTTCTTGATAAGCTTTATACTTTCCTCCTCAACTCTGTCGT
GCTTGAGAAAGATTAGTGAAAACGGTTGAAAATTCTGTGTGACAGGTCGTGGTTTTACTCCCTTGAGCAATGAGGTTACCAGGTAAACTGCTTGT
GCTATTTTTTGTGTTTTCTTACTCTTTGTTCTTACTTCGAGTGTGTCAAGGGACCTGGACCGTTGACTGATATTGGACGCAAGTATTCTAACAAG
TAGTAATTGTTTTTTCTTACTCACCTATAAAGGGGAACGGTAGCAGAATCATCTGAGCCTGCTATGAATTCTTGATATTTTGTTGATAGAAAAAT
GTGTTTGAGCTTATCAATTCCTTTGAAGCCGGTAGCTAGTATGACTAAGTCGGATTTTATTGTTTCGGCCTGACCATCGAGCACAATACCTTCTT
TAGAAAATCCAAAGCAGTCTGCTTTCTTGATAAGCTTTATACTTTCCTCCTCAACTCTGTCGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252614] | SGN-U579664 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67464 [Download][View] | Facility Assigned ID: TBFDA27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0153 | Quality Trim Threshold: 14.5 |
Working
