EST details — SGN-E310092
| Search information |
| Request: 310092 | Match: SGN-E310092 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C100400 | Clone name: cLEZ-8-B18 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: Alias clone SGN-C183432 is on microarray TOM1: SGN-S1-1-3.3.1.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183432 [TUS-42-C14] | Trace: SGN-T196008 | EST: SGN-E394682 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183432 [TUS-42-C14] | Trace: SGN-T199671 | EST: SGN-E398345 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183432 [TUS-42-C14] | Trace: SGN-T200453 | EST: SGN-E399570 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183432 [TUS-42-C14] | Trace: SGN-T200277 | EST: SGN-E399229 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E310092 | Length: 620 bp (821 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310092 [] (trimmed)
GGCTGTATTGGAGTGCCACATGGCCCAAAGAAGTTGAGCAGCTTGCAAGACAATTCCTTTTCAATGCATACAAAGTAATTATTGGTTCAGCTGAC
CTGAAAGCTAATCACGCTATTCGTCAGCATGTGGAAATCGTCTCGGAGAGCCAGAAGTATAATAAATTAGTAAAGTTGCTGGAAGATATTATGGA
TGGTAGTCGGATTTTAATATTCATGGACACTAAAAAGGGGTGTGACCAAGTAACTCGGCAGCTCCGGATGGATGGTTGGCCGGCACTTTCTATTC
ATGGTGATAAGAGTCAAGCAGAAAGAGATTGGGTCCTTTCAGAATTCAAAGCTGGAAAGTCTCCTATAATGACAGCTACAGACGTTGCTGCTCGA
GGTCTAGATGTGAAGGATGTAAAGTTTGTAATCAACTATGATTTTCCTGGATCATTGGAGGACTATGTTCACCGAATTGGTAGAACGGGAAGAGC
TGGTGCCTCAGGGACAGCATACACATTCTTTACTGCAGCGAATGCTAGGTTTGCGAAGGACCTTGTTAACATTCTTGAGGAGGCTGGACAGAAAG
TCAGTCCTGAATTGGCAAAAATGGGACGTGGTGCTCCTCCCCCTCCTGGT
CTGAAAGCTAATCACGCTATTCGTCAGCATGTGGAAATCGTCTCGGAGAGCCAGAAGTATAATAAATTAGTAAAGTTGCTGGAAGATATTATGGA
TGGTAGTCGGATTTTAATATTCATGGACACTAAAAAGGGGTGTGACCAAGTAACTCGGCAGCTCCGGATGGATGGTTGGCCGGCACTTTCTATTC
ATGGTGATAAGAGTCAAGCAGAAAGAGATTGGGTCCTTTCAGAATTCAAAGCTGGAAAGTCTCCTATAATGACAGCTACAGACGTTGCTGCTCGA
GGTCTAGATGTGAAGGATGTAAAGTTTGTAATCAACTATGATTTTCCTGGATCATTGGAGGACTATGTTCACCGAATTGGTAGAACGGGAAGAGC
TGGTGCCTCAGGGACAGCATACACATTCTTTACTGCAGCGAATGCTAGGTTTGCGAAGGACCTTGTTAACATTCTTGAGGAGGCTGGACAGAAAG
TCAGTCCTGAATTGGCAAAAATGGGACGTGGTGCTCCTCCCCCTCCTGGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E310092] | SGN-U584535 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T122058 [Download][View] | Facility Assigned ID: TRZBF09TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
