EST details — SGN-E307079
| Search information |
| Request: 307079 | Match: SGN-E307079 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C96264 | Clone name: cLEY-15-D13 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192900 [TUS-66-N2] | Trace: SGN-T345342 | EST: SGN-E544467 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192900 [TUS-66-N2] | Trace: SGN-T345343 | EST: SGN-E544468 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E307079 | Length: 585 bp (904 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E307079 [] (trimmed)
GGGAAGTTCCTCTGTGTTCTTGCACCCAAAAGTGAACAAAAGGGAAAAGTTGTCCGCCGTCAACGAAAATATTTTCAGGCTTTACCTCCTGAACT
ACTTGCAGCAAGCAGAGTTTCTCTCGTTATTGATTGTTACAGCGGATAATGGCTGTTTGTGGTTCAAGAACTTCTCATATTGGCCATTTTGTTGG
TAAGATGGCTGCTAGGCGCCTGCATTATGCATTGGCGGTAAATAATAGTAGCGTCTCTTATAGCAATAGGAGCATTGAGAATGTTAGAAAAGCCA
ACATTAGTTTGAGAAATAAAGGCCAACCTCACAACTTCATGTTATCTCAATATTTTAAAACTAGTGTTGCAAAGAGGAAGGGACATGAAGGATTT
GGATTAGAAGGTTTTCGCGTTTTATCACTTGCACGTTTCTCTTCTGGAACTACTGCTCCCAGCAGCCTGTCTTCTGATAATACTAAGGAAAAGGA
ACAGACTGCAGATACTGTTGATTCTTCTGAGGGAAAGATACACCTGAAGCTGAATTCCGGATCATTTTATCTGCCTCATCCTGCGAAAGCAAAAA
CTGGTGGAGAGGATG
ACTTGCAGCAAGCAGAGTTTCTCTCGTTATTGATTGTTACAGCGGATAATGGCTGTTTGTGGTTCAAGAACTTCTCATATTGGCCATTTTGTTGG
TAAGATGGCTGCTAGGCGCCTGCATTATGCATTGGCGGTAAATAATAGTAGCGTCTCTTATAGCAATAGGAGCATTGAGAATGTTAGAAAAGCCA
ACATTAGTTTGAGAAATAAAGGCCAACCTCACAACTTCATGTTATCTCAATATTTTAAAACTAGTGTTGCAAAGAGGAAGGGACATGAAGGATTT
GGATTAGAAGGTTTTCGCGTTTTATCACTTGCACGTTTCTCTTCTGGAACTACTGCTCCCAGCAGCCTGTCTTCTGATAATACTAAGGAAAAGGA
ACAGACTGCAGATACTGTTGATTCTTCTGAGGGAAAGATACACCTGAAGCTGAATTCCGGATCATTTTATCTGCCTCATCCTGCGAAAGCAAAAA
CTGGTGGAGAGGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E307079] | SGN-U571700 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T119502 [Download][View] | Facility Assigned ID: TRYCG19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0086 | Quality Trim Threshold: 14.5 |
Working
