EST details — SGN-E300414
| Search information |
| Request: 300414 | Match: SGN-E300414 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C87009 | Clone name: cLET-45-A16 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185080 is on microarray TOM1: SGN-S1-1-3.4.12.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185080 [TUS-46-H6] | Trace: SGN-T192008 | EST: SGN-E390682 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185080 [TUS-46-H6] | Trace: SGN-T192260 | EST: SGN-E390934 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E300414 | Length: 501 bp (918 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E300414 [] (trimmed)
GCTGGGTTTGAAGAGATCTCTATCAGATCGGATGAACCAGCCTATCATGTGTGGAGGTGAGCCTAGGATAATGCTCGAGAAAATCAGAGGAAAAG
CCGACCCTCCTATTTATACGATTCAGTTATGTATTCCCAAGCATGCTCTTAGTTTGATCTTCTCATTCACAAATGGAATCGAATGGGATGGTCCC
TATAGACTACAATTTCAAGTCCCCAAGGCTTGGAGAAATAAACCAACTGAATTCTTCACTGAGGGTCTTACACAGGAGTTGAGCCAGGAGGGTGC
CTGTGACAGGGCAATCTTCCCGGACTCGAGTATCTTGATCACAAGATGTGCTATGGTTGGTAACTTGAATGGGGATGGAGGTGATCGTTGCAATC
TTGATCTAATACCGGGATGCATTGATCCAGATTCTCCCCAGTATAATCCACTAGCCAATGTAGATGATGGATCTTGTCCACCATATTCAGATTCT
GAGGATTAACTTTCAGTACATATATA
CCGACCCTCCTATTTATACGATTCAGTTATGTATTCCCAAGCATGCTCTTAGTTTGATCTTCTCATTCACAAATGGAATCGAATGGGATGGTCCC
TATAGACTACAATTTCAAGTCCCCAAGGCTTGGAGAAATAAACCAACTGAATTCTTCACTGAGGGTCTTACACAGGAGTTGAGCCAGGAGGGTGC
CTGTGACAGGGCAATCTTCCCGGACTCGAGTATCTTGATCACAAGATGTGCTATGGTTGGTAACTTGAATGGGGATGGAGGTGATCGTTGCAATC
TTGATCTAATACCGGGATGCATTGATCCAGATTCTCCCCAGTATAATCCACTAGCCAATGTAGATGATGGATCTTGTCCACCATATTCAGATTCT
GAGGATTAACTTTCAGTACATATATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E300414] | SGN-U581329 | Tomato 200607 | Build 2 | 62 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T111586 [Download][View] | Facility Assigned ID: TMEGV08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0224 | Quality Trim Threshold: 14.5 |
Working
