EST details — SGN-E297612
| Search information |
| Request: 297612 | Match: SGN-E297612 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C84219 | Clone name: cLET-28-A11 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184738 is on microarray TOM1: SGN-S1-1-1.1.14.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184738 [TUS-45-I24] | Trace: SGN-T196564 | EST: SGN-E395238 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184738 [TUS-45-I24] | Trace: SGN-T196565 | EST: SGN-E395239 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E297612 | Length: 490 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E297612 [] (trimmed)
TGCAAGTCCAACAACTGTTTCCCTGTGGTACAACTACAACAGCAGTTACTCCGTCTGCGCCAGTACCGCCGGCAGCTTTTCATCTCCGATCCTCC
GGTTCACGACGGCGATATCCTTCTCTAGACATACTCAAGAGTCCATCCAGTTTGACCTAAGATGGACCAGTATGAAAAAGTTGAAAAGATTGGTG
AAGGAACGTACGGCGTAGTGTACAAAGCTCGTGATCGTGTAACTAATGAAACTATTGCACTGAAGAAAATTCGGCTGGAGCAGGAAGACGAGGGT
GTGCCAAGCACGGCTATTAGAGAAATCTCCCTCTTGAAAGAGATGCAGCATGGAAACATTGTGAGGTTGCAAGATGTGGTTCACAGTGAGAAGCG
ATTATATCTAGTGTTTGAATATCTCGACTTGGATTTGAAGAAGCATATGGACTCATGTCCCGAGTTCTCTAAGGATCCGCGTCTTGTAAAAATGT
TTTTGTATCAAATTC
GGTTCACGACGGCGATATCCTTCTCTAGACATACTCAAGAGTCCATCCAGTTTGACCTAAGATGGACCAGTATGAAAAAGTTGAAAAGATTGGTG
AAGGAACGTACGGCGTAGTGTACAAAGCTCGTGATCGTGTAACTAATGAAACTATTGCACTGAAGAAAATTCGGCTGGAGCAGGAAGACGAGGGT
GTGCCAAGCACGGCTATTAGAGAAATCTCCCTCTTGAAAGAGATGCAGCATGGAAACATTGTGAGGTTGCAAGATGTGGTTCACAGTGAGAAGCG
ATTATATCTAGTGTTTGAATATCTCGACTTGGATTTGAAGAAGCATATGGACTCATGTCCCGAGTTCTCTAAGGATCCGCGTCTTGTAAAAATGT
TTTTGTATCAAATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E297612] | SGN-U572517 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T109406 [Download][View] | Facility Assigned ID: TMEEE06TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0178 | Quality Trim Threshold: 14.5 |
Working
