EST details — SGN-E296095
| Search information |
| Request: 296095 | Match: SGN-E296095 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C83292 | Clone name: cLET-24-A24 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184640 is on microarray TOM1: SGN-S1-1-3.1.14.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184640 [TUS-45-E22] | Trace: SGN-T196549 | EST: SGN-E395223 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184640 [TUS-45-E22] | Trace: SGN-T198616 | EST: SGN-E397290 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E296095 | Length: 510 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E296095 [] (trimmed)
GTAAGTTTGAGAAACGTCTAGTCTAGAGAGAAATGGCAAATCCAAAGGTTTTCTTTGACCTTACCATCGGTGGTGCACCAGCTGGTCGTGTGGTG
ATGGAGCTCTTCGCCGATACCACTCCCAAAACCGCTGAGAACTTCCGAGCTCTTTGTACCGGTGAGAAAGGTGTTGGAAAGATGGGGAAGCCTTT
GCACTACAAGGGCTCAACCTTCCACCGTGTGATCCCAGGGTTCATGTGTCAAGGAGGTGATTTCACCGCCGGAAACGGGACCGGAGGAGAGTCGA
TCTATGGAGCCAAATTCAACGATGAGAACTTCGTTAAGAAGCACACCGGGCCTGGAATCCTCTCCATGGCTAATGCTGGACCTGGAACCAACGGA
TCTCAGTTGTTCATCTGTACCGATAAGACTGATGTGGCTCAACGGAAAGCACGTCGTGTTTGGACAAGTTGTTGAAGGCATGGATGTGATTAATA
AGGCAGAGGCTGTTGGATCTAGCTCTGGAAGGTGC
ATGGAGCTCTTCGCCGATACCACTCCCAAAACCGCTGAGAACTTCCGAGCTCTTTGTACCGGTGAGAAAGGTGTTGGAAAGATGGGGAAGCCTTT
GCACTACAAGGGCTCAACCTTCCACCGTGTGATCCCAGGGTTCATGTGTCAAGGAGGTGATTTCACCGCCGGAAACGGGACCGGAGGAGAGTCGA
TCTATGGAGCCAAATTCAACGATGAGAACTTCGTTAAGAAGCACACCGGGCCTGGAATCCTCTCCATGGCTAATGCTGGACCTGGAACCAACGGA
TCTCAGTTGTTCATCTGTACCGATAAGACTGATGTGGCTCAACGGAAAGCACGTCGTGTTTGGACAAGTTGTTGAAGGCATGGATGTGATTAATA
AGGCAGAGGCTGTTGGATCTAGCTCTGGAAGGTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E296095] | SGN-U577630 | Tomato 200607 | Build 2 | 444 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T108612 [Download][View] | Facility Assigned ID: TMEDP12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.988 | Expected Error Rate: 0.0216 | Quality Trim Threshold: 14.5 |
Working
