EST details — SGN-E294025
| Search information |
| Request: 294025 | Match: SGN-E294025 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C80934 | Clone name: cLET-13-N16 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179829 is on microarray TOM1: SGN-S1-1-6.1.1.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179829 [TUS-32-M11] | Trace: SGN-T185858 | EST: SGN-E373195 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179829 [TUS-32-M11] | Trace: SGN-T185859 | EST: SGN-E373196 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294025 | Length: 499 bp (931 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294025 [] (trimmed)
GAGAATGGATACTGTGTTTTCAGTGGATGAGATTGCCGATCAATTATGGTCATCGCCGCCACCGATGAGGTTATCTCATGACTTGGATTCTTCTT
CCGCCACTTCGTCCTCTAAAATGATGAACAGGAGCTCGTCGGAGTGGGCTTTTCAGCGTTTCCTTCAAGAGGCTGCAGCAGCTGAAACTACTTCC
TCGTCTTCTTCACAGCAGATCAAGCTTAATCATAATTTAATTCCTGATCAATCGAAGCCTGTGTCATCGTTTGTCTCTGAACCTCCGATTGATTC
CGATGAACATCAGGCTTTCCTCAAAAGACGCCTGGATTTGGCATGTGCCGCCTTCGCTTTGAATCGTGCAAGCTATATAAAATCTCAAGATTCGG
CTTCTTTGCCACCCGAAAAAGGATCACTGGCAGCTAATGCATCACTCTGTGGATCTCAACTTCCTCCAAAAGGATCTGGGCAAGAATTGGCAAAA
GTTCAAGATAAAGATGCTGGTGAG
CCGCCACTTCGTCCTCTAAAATGATGAACAGGAGCTCGTCGGAGTGGGCTTTTCAGCGTTTCCTTCAAGAGGCTGCAGCAGCTGAAACTACTTCC
TCGTCTTCTTCACAGCAGATCAAGCTTAATCATAATTTAATTCCTGATCAATCGAAGCCTGTGTCATCGTTTGTCTCTGAACCTCCGATTGATTC
CGATGAACATCAGGCTTTCCTCAAAAGACGCCTGGATTTGGCATGTGCCGCCTTCGCTTTGAATCGTGCAAGCTATATAAAATCTCAAGATTCGG
CTTCTTTGCCACCCGAAAAAGGATCACTGGCAGCTAATGCATCACTCTGTGGATCTCAACTTCCTCCAAAAGGATCTGGGCAAGAATTGGCAAAA
GTTCAAGATAAAGATGCTGGTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294025] | SGN-U572089 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105868 [Download][View] | Facility Assigned ID: TMEBZ80TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
