EST details — SGN-E293596
| Search information |
| Request: 293596 | Match: SGN-E293596 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C81361 | Clone name: cLET-15-P19 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184739 is on microarray TOM1: SGN-S1-1-8.2.14.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81361 [cLET-15-P19] | Trace: SGN-T106546 | EST: SGN-E293595 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C184739 [TUS-45-J1] | Trace: SGN-T198704 | EST: SGN-E397378 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184739 [TUS-45-J1] | Trace: SGN-T198705 | EST: SGN-E397379 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293596 | Length: 485 bp (988 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E293596 [] (trimmed)
GGCGAACCAAAAATACAAAGAGGTTATTTCTCTCAAGGGGTAAAAAGATTGCCCCTTTTCGACATTTATAATCCTCTTTTTCTCTTTGTTCGCCG
ATGGGTTCTTCACTTTCCTGTTTCTTGAGAATGGAAACTTTCTTATTCACCTCCGAGTCTGTGAACGAGGGTCACCCAGACAAGCTCTGTGATCA
GATCTCTGATGCAGTTCTTGATGCCTGCCTTGAGCAAGATCCCGAGAGCAAAGTTGCATGTGAAACTTGCACCAAGACCAACTTGGTCATGGCCT
TTGGTGAGATCACAACCAAGGCTATTGTAGACTATGAGAAGATTGTGCGTGACACATGCCGTAATATTGGATTTGTTTCTGATGATGTTGGTCTT
GATGCTGACAACTGCAAGGTCCTTGCTTACATTGAGCAGCATAGTCCTGATATTGCTCAAGGTGTCCACGGCCATCTGACCAAACGCCCCGAGGA
GATTGGTGCT
ATGGGTTCTTCACTTTCCTGTTTCTTGAGAATGGAAACTTTCTTATTCACCTCCGAGTCTGTGAACGAGGGTCACCCAGACAAGCTCTGTGATCA
GATCTCTGATGCAGTTCTTGATGCCTGCCTTGAGCAAGATCCCGAGAGCAAAGTTGCATGTGAAACTTGCACCAAGACCAACTTGGTCATGGCCT
TTGGTGAGATCACAACCAAGGCTATTGTAGACTATGAGAAGATTGTGCGTGACACATGCCGTAATATTGGATTTGTTTCTGATGATGTTGGTCTT
GATGCTGACAACTGCAAGGTCCTTGCTTACATTGAGCAGCATAGTCCTGATATTGCTCAAGGTGTCCACGGCCATCTGACCAAACGCCCCGAGGA
GATTGGTGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293596] | SGN-U580634 | Tomato 200607 | Build 2 | 415 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106547 [Download][View] | Facility Assigned ID: TMECG94TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0231 | Quality Trim Threshold: 14.5 |
Working
