EST details — SGN-E293337
| Search information |
| Request: 293337 | Match: SGN-E293337 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C81824 | Clone name: cLET-18-G15 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184540 is on microarray TOM1: SGN-S1-1-7.1.14.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184540 [TUS-45-A18] | Trace: SGN-T198602 | EST: SGN-E397276 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184540 [TUS-45-A18] | Trace: SGN-T199738 | EST: SGN-E398412 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293337 | Length: 556 bp (920 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293337 [] (trimmed)
CAAAAAAAAGTTAGAAGTTGTGATCATTCTCTCTCACTAATACAGAAATGGCAACCATCACTGCTTGCACCACAACTTCTTCGGTGGCGCGTGCC
GCCCTCGTGCAAAGGGGATCTGTATCTCGCACCTCAGTTGTTCTTGGATTACCATCAATGAGCAAGGGTGGAAAAGTGAAATGTTCAATGGAAGG
AAAGGGAAAGGGTGAATCAAAGTTGGGAATGGGAGAATCATTGATGGCAGCAGCAGTAGCAGCAAGCATGTCAAGCCCAGTAGCAATGGCTTTGG
TTGATGAAAGAATGAGCACTGAAGGAACAGGGCTACCATTTGGACTCAGCAACAATCTTCTTGGTTGGATCCTTTTAGGTGTATTTGGTTTGATT
TGGTCTCTCTACACTGTTTACACTTCTGGACTTGATGAAGATGAAGAATCTGGAATGTCTCTTTAATTTTTGTCTATTATTTTTTTTTTGTCATA
CTATAATCAAACTTTAATGAATTTAACTACTTCTTTTGATGTTGTATCTCTTACACTCTTCAATTGAAGTATTGTATTTTT
GCCCTCGTGCAAAGGGGATCTGTATCTCGCACCTCAGTTGTTCTTGGATTACCATCAATGAGCAAGGGTGGAAAAGTGAAATGTTCAATGGAAGG
AAAGGGAAAGGGTGAATCAAAGTTGGGAATGGGAGAATCATTGATGGCAGCAGCAGTAGCAGCAAGCATGTCAAGCCCAGTAGCAATGGCTTTGG
TTGATGAAAGAATGAGCACTGAAGGAACAGGGCTACCATTTGGACTCAGCAACAATCTTCTTGGTTGGATCCTTTTAGGTGTATTTGGTTTGATT
TGGTCTCTCTACACTGTTTACACTTCTGGACTTGATGAAGATGAAGAATCTGGAATGTCTCTTTAATTTTTGTCTATTATTTTTTTTTTGTCATA
CTATAATCAAACTTTAATGAATTTAACTACTTCTTTTGATGTTGTATCTCTTACACTCTTCAATTGAAGTATTGTATTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293337] | SGN-U578420 | Tomato 200607 | Build 2 | 151 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107162 [Download][View] | Facility Assigned ID: TMECQ44TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0147 | Quality Trim Threshold: 14.5 |
Working
