EST details — SGN-E292939

Search information 
Request: 292939Match: SGN-E292939
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C80270Clone name: cLET-11-L4
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179708 is on microarray TOM1: SGN-S1-1-7.4.1.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179708 [TUS-32-H10] Trace: SGN-T186228 EST: SGN-E372747 Direction: 3' Facility: INRA
Clone: SGN-C179708 [TUS-32-H10] Trace: SGN-T186229 EST: SGN-E372748 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292939Length: 411 bp (883 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E292939 [] (trimmed) CAGATCTTACTCTTAACAACATGTATATACATATACATATTATATAGCAGCTTTGATATGCATTTTTTTGGTGTGTGTGTGGGTAACGTACTGAT
TAACCACATCACGTTTGATTCATGATCCATACATGGCGTCTACTAAAAATTTCCACTACCTAAACGGCGGCGACAGTCTCGCTTGTGGCGGAAAC
GTCAGATCCCTTCCCGCCGGCTACGGCGGCAGCGACGGAGTTCTTCATGTAGTCCTTTCTAGATGCAACCAACGAACACTTGTCCTTCTTCTCAT
CTAGATTCATCTGCTGCTGTCTACACTCTAGACTGCAAAAAGCACTATCTCCTCTGTACATGTAGATATCCCGGCCAGGGATTAACCGGCGTTTA
CAGAGGAAGCAAGCTTTCAAAAAATTAGCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292939] SGN-U580528 Tomato 200607 Build 2 56 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105402 [Download][View] Facility Assigned ID: TMEBR62TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.990 Expected Error Rate: 0.0259 Quality Trim Threshold: 14.5