EST details — SGN-E292786
Search information |
Request: 292786 | Match: SGN-E292786 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C80033 | Clone name: cLET-11-A9 |
| ||
Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184952 is on microarray TOM1: SGN-S1-1-3.2.12.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C184952 [TUS-46-B22] | Trace: SGN-T191991 | EST: SGN-E390665 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E292786 | Length: 366 bp (882 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E292786 [] (trimmed)
GTCGCAGAGCAGTCAACCTAAGGGATCTTCCAACTCACTTGCTGATAAATTCGATTCAAACTTATATTTGGGCAATTCTAAGAATTCAGCTAGTG
GAGTAGGTTCTATGCCTACAGAGACAAAAGGCTCACAAGGGACAGCTGATCAGGAAAGAAAGAATTCTACTAAGGACAGCTCAGCATCAGCCAAA
GTTAGTGATGGGGCTAGCAGTATTGCAAAAACAAGTGGAAGTGCCAAAATTAGTGATCGAGCAGATTTTCTTGAGAGTGGTAAGAGCAGCATCTG
TAGGGGGAGCACAGGAACTGACGTAAGTGAGGAGAGTACTTCTAGCAGCTTGAGCAGCAGCGTTAACAAACCCCACAAAGC
GAGTAGGTTCTATGCCTACAGAGACAAAAGGCTCACAAGGGACAGCTGATCAGGAAAGAAAGAATTCTACTAAGGACAGCTCAGCATCAGCCAAA
GTTAGTGATGGGGCTAGCAGTATTGCAAAAACAAGTGGAAGTGCCAAAATTAGTGATCGAGCAGATTTTCTTGAGAGTGGTAAGAGCAGCATCTG
TAGGGGGAGCACAGGAACTGACGTAAGTGAGGAGAGTACTTCTAGCAGCTTGAGCAGCAGCGTTAACAAACCCCACAAAGC
Unigenes |
Current Unigene builds | |||||
[SGN-E292786] | SGN-U567366 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T105249 [Download][View] | Facility Assigned ID: TMEBO05TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.945 | Expected Error Rate: 0.0123 | Quality Trim Threshold: 14.5 |