EST details — SGN-E292710

Search information 
Request: 292710Match: SGN-E292710
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C80139Clone name: cLET-11-F5
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179655 is on microarray TOM1: SGN-S1-1-4.2.1.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179655 [TUS-32-F5] Trace: SGN-T186052 EST: SGN-E372899 Direction: 3' Facility: INRA
Clone: SGN-C179655 [TUS-32-F5] Trace: SGN-T186053 EST: SGN-E372900 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292710Length: 424 bp (819 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E292710 [] (trimmed) GTTTTACGGCAAAAATGGCTGTTCAAGCTATCTCCACAGTGGCAGCAACTTCTAAGAGCATCAATCAGCTGAATTGCAGAGGAACCGATTCATTT
CTCTGGACCAAAAACCCATTGGAACTGAAAAATCTGCAGTGTAAATGGCTAGGTACTCCAATCAAATTCTCTCTTCAGTCCAAGAATTTCAAGCA
ATTTCTGTCAAAACAGTGCACTATTAGAGCAAATGTCTCCTTCGTCCTTCCCCGTGGGAAGTCGGAGCCTACAGTACCAATAGAGAAAATTCCTA
AATGGTCAGCAAAGGCGGTAAAATCATTTACCATGGCTGAACTGGAAGCAAGAAAACTTAAATATGATACTACTGGAACAGAAGCTCTTATCCTG
GGGATGTTGATTGAAGGGACAAATTTTGCTTCAAAATATTTGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292710] SGN-U569614 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105173 [Download][View] Facility Assigned ID: TMEBQ27TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0146 Quality Trim Threshold: 14.5