EST details — SGN-E292692
| Search information |
| Request: 292692 | Match: SGN-E292692 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C80332 | Clone name: cLET-11-O2 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179736 is on microarray TOM1: SGN-S1-1-3.1.1.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179736 [TUS-32-I14] | Trace: SGN-T185995 | EST: SGN-E372500 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179736 [TUS-32-I14] | Trace: SGN-T185996 | EST: SGN-E372501 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292692 | Length: 513 bp (769 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292692 [] (trimmed)
GTAAATGTGATTCGTACTATGACCGCTCTTCAAGGAAAGCATGCAAATGGCGAGAATGCATGGATAGGCATTGATGGAAACACTGGTGAGATTAC
CGACATGAAAGAGCGGAAGATATGGGATTCCTATGCTGTAAAAGCACAGGCTTTTAAAACTGCCATTGAAGCTGCTTGCCTACTTCTGAGAATTG
ATGACATTGTGAGTGGAATAAAGAAGAAGCAAGCCCCTGGAGCAGGACAAGGTCCATCAAAACCAAAAATAGACGAAGAAGGTGATGCAGACAAT
GACCAGCTAATTCCGGAATGAACATGATATACTATGCTGCAATGGAAATGCTTATGCATTTGATAACCACTTGGAAGTTTTCATCTACTTCAGTA
TAGTCTGCCCTTGACTGATTGCTTGAACTTTTTGTGCTTGACATGTAACTTCTGCTGTTTTTGACTGCTGGCAGTTGTTGGTTGTATTTGAAATA
GATTTTGTTTCAGTTTTTGGTTTTAAATTAAATTTGAT
CGACATGAAAGAGCGGAAGATATGGGATTCCTATGCTGTAAAAGCACAGGCTTTTAAAACTGCCATTGAAGCTGCTTGCCTACTTCTGAGAATTG
ATGACATTGTGAGTGGAATAAAGAAGAAGCAAGCCCCTGGAGCAGGACAAGGTCCATCAAAACCAAAAATAGACGAAGAAGGTGATGCAGACAAT
GACCAGCTAATTCCGGAATGAACATGATATACTATGCTGCAATGGAAATGCTTATGCATTTGATAACCACTTGGAAGTTTTCATCTACTTCAGTA
TAGTCTGCCCTTGACTGATTGCTTGAACTTTTTGTGCTTGACATGTAACTTCTGCTGTTTTTGACTGCTGGCAGTTGTTGGTTGTATTTGAAATA
GATTTTGTTTCAGTTTTTGGTTTTAAATTAAATTTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292692] | SGN-U582540 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105155 [Download][View] | Facility Assigned ID: TMEBP85TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.949 | Expected Error Rate: 0.0098 | Quality Trim Threshold: 12.5 |
Working
