EST details — SGN-E292220
| Search information |
| Request: 292220 | Match: SGN-E292220 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82165 | Clone name: cLET-1-B6 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184745 is on microarray TOM1: SGN-S1-1-2.2.14.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184745 [TUS-45-J7] | Trace: SGN-T198709 | EST: SGN-E397383 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184745 [TUS-45-J7] | Trace: SGN-T198710 | EST: SGN-E397384 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292220 | Length: 553 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292220 [] (trimmed)
CGAGAGCAGAAGAAGAAAATGCCGGCCGGTCATGGTTTGAGGTCTCGAACGAGAGATTCATTCTCTCGCGCCTTCAGGAAGAAGGGTACCATCGC
ACTTTCGACCTACTTGAGGATTTTCAAAATCGGAGATTATGTTGATATCAAGGTGAATGGTGCTATTCACAAGGGAATGCCTCACAAGTTCTACC
ATGGACGTACTGGTCGTGTTTGGAATGTTACCAAACGCGCCGTTGGTGTTGAAGTCAACAAGCAGGTTCGTAACAAGATCTTAAGAAAGAGGATC
CATGTGAGGATTGAGCATGTCCAGCAATCTCGATGCACCGAAGAAGTCAGGGAAAGGATCAAGAAGAATGACCAACTTAAGGCTGACGCCAAGGC
TAGAGGAGAAGTCATCAGCACAAAAAGGCAACCACTAGGACCCAAACCAGGGTTCATGGTTGAAGGTGCTACTCTGGAGACAGTTACCCCCATAC
CATATGATGTGGTTAATGATTTGAAGGGAGGATATTGATCTTAATCTGTTTCTGAGAGGCTGGTTTTTCTATTTGGTT
ACTTTCGACCTACTTGAGGATTTTCAAAATCGGAGATTATGTTGATATCAAGGTGAATGGTGCTATTCACAAGGGAATGCCTCACAAGTTCTACC
ATGGACGTACTGGTCGTGTTTGGAATGTTACCAAACGCGCCGTTGGTGTTGAAGTCAACAAGCAGGTTCGTAACAAGATCTTAAGAAAGAGGATC
CATGTGAGGATTGAGCATGTCCAGCAATCTCGATGCACCGAAGAAGTCAGGGAAAGGATCAAGAAGAATGACCAACTTAAGGCTGACGCCAAGGC
TAGAGGAGAAGTCATCAGCACAAAAAGGCAACCACTAGGACCCAAACCAGGGTTCATGGTTGAAGGTGCTACTCTGGAGACAGTTACCCCCATAC
CATATGATGTGGTTAATGATTTGAAGGGAGGATATTGATCTTAATCTGTTTCTGAGAGGCTGGTTTTTCTATTTGGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292220] | SGN-U578089 | Tomato 200607 | Build 2 | 121 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102494 [Download][View] | Facility Assigned ID: TMEAD03TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 14.5 |
Working
