EST details — SGN-E292203
| Search information |
| Request: 292203 | Match: SGN-E292203 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82317 | Clone name: cLET-1-J15 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179493 is on microarray TOM1: SGN-S1-1-6.3.2.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179493 [TUS-31-O11] | Trace: SGN-T185079 | EST: SGN-E372622 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179493 [TUS-31-O11] | Trace: SGN-T185080 | EST: SGN-E372623 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292203 | Length: 615 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292203 [] (trimmed)
GGCAAGAGAAGTAGAAGAAGAAATGGACGCAGGTGTAGTTGCTGCCCCCGCCCCGGCCGCCGCCGTCGATGCAAGCAAAGAGAATAAGGTTCACA
CTGATGTCATGCTTTTCAATCGCTGGAGCTATGATGGAGTTGAGATCAATGACATGTCTGTTGAGGATTACATCACCGCAACTGCTAACAAGCAC
CCAGTTTACATGCCACACACAGCTGGTAGATACCAGGCCAAGCGTTTCAGGAAGGCTCAGTGCCCAATCGTTGAGAGGCTCACAAATTCTCTCAT
GATGCACGGAAGGAACAACGGAAAGAAGCTCATGGCTGTTCGTATTATTAAGCATGCAATGGAGATCATTCATTTGTTGACTGACCAAAACCCAA
TTCAAGTCATTGTTGATGCTGTTATCAACAGTGGGCCAAGGGAAGATGCAACACGTATTGGTTCTGCTGGTGTTGTCAGACGTCAAGCTGTTGAT
ATTTCTCCACTCCGTCGTGTTAACCAAGCAATTTATTTGCTGACAACTGGTGCACGTGAGAGTGCTTTCAGGAACATCAAGACCATAGCTGAGTG
CCTTGCTGATGAACTCATCAATGCTGCCAAAGGTTCTTCAAATAG
CTGATGTCATGCTTTTCAATCGCTGGAGCTATGATGGAGTTGAGATCAATGACATGTCTGTTGAGGATTACATCACCGCAACTGCTAACAAGCAC
CCAGTTTACATGCCACACACAGCTGGTAGATACCAGGCCAAGCGTTTCAGGAAGGCTCAGTGCCCAATCGTTGAGAGGCTCACAAATTCTCTCAT
GATGCACGGAAGGAACAACGGAAAGAAGCTCATGGCTGTTCGTATTATTAAGCATGCAATGGAGATCATTCATTTGTTGACTGACCAAAACCCAA
TTCAAGTCATTGTTGATGCTGTTATCAACAGTGGGCCAAGGGAAGATGCAACACGTATTGGTTCTGCTGGTGTTGTCAGACGTCAAGCTGTTGAT
ATTTCTCCACTCCGTCGTGTTAACCAAGCAATTTATTTGCTGACAACTGGTGCACGTGAGAGTGCTTTCAGGAACATCAAGACCATAGCTGAGTG
CCTTGCTGATGAACTCATCAATGCTGCCAAAGGTTCTTCAAATAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292203] | SGN-U577370 | Tomato 200607 | Build 2 | 131 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102477 [Download][View] | Facility Assigned ID: TMEAC56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 14.5 |
Working
