EST details — SGN-E292167
| Search information |
| Request: 292167 | Match: SGN-E292167 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82298 | Clone name: cLET-1-I16 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179477 is on microarray TOM1: SGN-S1-1-6.2.2.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179477 [TUS-31-N19] | Trace: SGN-T185427 | EST: SGN-E373289 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179477 [TUS-31-N19] | Trace: SGN-T185428 | EST: SGN-E373290 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292167 | Length: 604 bp (873 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292167 [] (trimmed)
GGTGAACCAGGGACGAATGGCCAACACAGCTTTTACCAATTAATTCACCAGGGCCGTGTTATTCCTTGTGATTTTATTGGTGTTGTTAAGAGTCA
GCAGCCTATTTACCTAAAAGATGAAGTGGTGAATAACCATGATGAGCTCATGTCGAACTTCTTTGCGCAGCCAGATGCCCTTGCTTATGGGAAGT
ATCAACTTTCTTCACAGACACCAGAGCAGTTGCAAAAGGAGAATATTCCTGAGCATCTTGTTTCTCATAAGACATTTTCTGGAAATCGACCTTCT
CTAAGTATACTACTTCCATCATTGTCTGCTTACAATATTGGACAGTTACTGGCCATCTACGAGCACAGAGTTGCAGTCCAAGGCTTCGTATGGGG
TATCAATTCTTTTGATCAGTGGGGTGTGGAGCTAGGAAAGTCTCTAGCGACTCAAGTTAGAAAGCAACTTCATGCATCTCGTAAGAAAGGAGAAT
CAGTTGAAGGCTTCAATTTCAGCACCAAAATGTTGATAACAAGATATCTCGAGGCAAGTGCTGATGTTCCTTCTGATCCTTCAACTCTTCTGCCA
AATATATGAGGTATGTTAAGAATCGGGTTTGATG
GCAGCCTATTTACCTAAAAGATGAAGTGGTGAATAACCATGATGAGCTCATGTCGAACTTCTTTGCGCAGCCAGATGCCCTTGCTTATGGGAAGT
ATCAACTTTCTTCACAGACACCAGAGCAGTTGCAAAAGGAGAATATTCCTGAGCATCTTGTTTCTCATAAGACATTTTCTGGAAATCGACCTTCT
CTAAGTATACTACTTCCATCATTGTCTGCTTACAATATTGGACAGTTACTGGCCATCTACGAGCACAGAGTTGCAGTCCAAGGCTTCGTATGGGG
TATCAATTCTTTTGATCAGTGGGGTGTGGAGCTAGGAAAGTCTCTAGCGACTCAAGTTAGAAAGCAACTTCATGCATCTCGTAAGAAAGGAGAAT
CAGTTGAAGGCTTCAATTTCAGCACCAAAATGTTGATAACAAGATATCTCGAGGCAAGTGCTGATGTTCCTTCTGATCCTTCAACTCTTCTGCCA
AATATATGAGGTATGTTAAGAATCGGGTTTGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292167] | SGN-U576755 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102441 [Download][View] | Facility Assigned ID: TMEAB56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
