EST details — SGN-E292134
| Search information |
| Request: 292134 | Match: SGN-E292134 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82384 | Clone name: cLET-1-M15 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184749 is on microarray TOM1: SGN-S1-1-6.2.14.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82384 [cLET-1-M15] | Trace: SGN-T102588 | EST: SGN-E292314 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C184749 [TUS-45-J11] | Trace: SGN-T198712 | EST: SGN-E397386 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184749 [TUS-45-J11] | Trace: SGN-T198713 | EST: SGN-E397387 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292134 | Length: 545 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292134 [] (trimmed)
CTGCATTTCACCGTGTTATTAAAGATTTCATGATTCAAGGGGGTGATTTCGACAAGGGAAATGGAACCGGTGGTAAAAGCATATATGGTCGTACC
TTCAAGGATGAAAACTTCAAGTTGGTTCATACCGGACCTGGGATTGTTAGCATGGCTAATGCAGGGCCTAATACCAACGGAAGCCAATTCTTCAT
TTGCACTGTAAAGACCCCATGGCTGGATCAAAAGCATGTTGTGTTTGGGCAAGTTTTAGAAGGCATGGACATTGTGAAGTTGATCGAGTCCCAGG
AGACTGATAGGGGTGACCGTCCAAGGAAGAGGGTTGTCATCAGTGACTGTGGTGAGCTACCTATAGTTTGAGGCGAGAATATAACTGTTTAGCAC
TTCATCTTTGCACACAATGGATATATGGACCGTTGTGAGATATAGAGCATATTCAGTAGTGAGTTTTCATCCAAATCCCAGGCTTTTTTTTTTTT
TTTTTTTAAAAGCAACAATAGTCTCTTACCATCCCATCAATATTCAATGTTAACTGAAATTGCATACATC
TTCAAGGATGAAAACTTCAAGTTGGTTCATACCGGACCTGGGATTGTTAGCATGGCTAATGCAGGGCCTAATACCAACGGAAGCCAATTCTTCAT
TTGCACTGTAAAGACCCCATGGCTGGATCAAAAGCATGTTGTGTTTGGGCAAGTTTTAGAAGGCATGGACATTGTGAAGTTGATCGAGTCCCAGG
AGACTGATAGGGGTGACCGTCCAAGGAAGAGGGTTGTCATCAGTGACTGTGGTGAGCTACCTATAGTTTGAGGCGAGAATATAACTGTTTAGCAC
TTCATCTTTGCACACAATGGATATATGGACCGTTGTGAGATATAGAGCATATTCAGTAGTGAGTTTTCATCCAAATCCCAGGCTTTTTTTTTTTT
TTTTTTTAAAAGCAACAATAGTCTCTTACCATCCCATCAATATTCAATGTTAACTGAAATTGCATACATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292134] | SGN-U581290 | Tomato 200607 | Build 2 | 68 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102408 [Download][View] | Facility Assigned ID: TMEAA80THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0041 | Quality Trim Threshold: 12.5 |
Working
